3#include <AMReX_Config.H>
19#ifdef AMREX_USE_BITTREE
20#include <Bittree_BittreeAmr.h>
34#if defined(AMREX_USE_GPU)
114 const int* is_per =
nullptr);
159 [[nodiscard]]
int MaxRefRatio (
int lev)
const noexcept;
174 r.reserve(a_finest_lev-a_coarsest_lev+1);
175 for (
int lev = a_coarsest_lev; lev <= a_finest_lev; ++lev) {
176 r.push_back(
geom[lev]);
182 r.reserve(a_finest_lev-a_coarsest_lev+1);
183 for (
int lev = a_coarsest_lev; lev <= a_finest_lev; ++lev) {
184 r.push_back(
grids[lev]);
190 r.reserve(a_finest_lev-a_coarsest_lev+1);
191 for (
int lev = a_coarsest_lev; lev <= a_finest_lev; ++lev) {
192 r.push_back(
dmap[lev]);
284 [[nodiscard]]
int GetLevel (
Box const& domain)
const noexcept;
292 [[nodiscard]]
int nErrorBuf (
int lev,
int direction = 0) const noexcept {
return n_error_buf[lev][direction]; }
329 [[nodiscard]]
bool LevelDefined (
int lev)
const noexcept;
441#ifdef AMREX_USE_BITTREE
442 bool use_bittree =
false;
443 std::unique_ptr<bittree::BittreeAmr> btmesh;
465 void ChopGridsExtended (
int lev,
BoxArray& ba,
int target_size)
const;
466 [[nodiscard]]
BoxArray MakeBaseGridsNoBoxSplit ()
const;
467 void MakeNewGridsExtended (
int lbase,
Real time,
int& new_finest,
469 void checkInputExtended ();
471 void InitAmrMesh (
int max_level_in,
const Vector<int>& n_cell_in,
473 const RealBox* rb =
nullptr,
int coord = -1,
474 const int* is_per =
nullptr);
476 static void ProjPeriodic (
BoxList& blout,
const Box& domain,
481std::ostream&
operator<< (std::ostream& os, AmrMesh
const& amr_mesh);
Fixed-size array types for use on GPU and CPU.
#define AMREX_ALWAYS_ASSERT(EX)
Definition AMReX_BLassert.H:50
Container and helper utilities for sets of boxes on integer index space.
Maps FABs in a FabArray to MPI processes.
Problem-domain geometry: maps between index space and physical space.
#define AMREX_D_PICK(a, b, c)
Definition AMReX_SPACE.H:173
#define AMREX_D_DECL(a, b, c)
Definition AMReX_SPACE.H:171
Tag storage used for AMR error estimation and refinement decisions.
Definition AMReX_AmrMesh.H:84
virtual void MakeNewLevelFromScratch(int lev, Real time, const BoxArray &ba, const DistributionMapping &dm)
Hook invoked by MakeNewGrids() to build a fresh level.
Definition AMReX_AmrMesh.H:384
const Geometry & Geom(int lev) const noexcept
Definition AMReX_AmrMesh.H:168
virtual void ErrorEst(int lev, TagBoxArray &tags, Real time, int ngrow)
Hook for tagging cells on level lev.
Definition AMReX_AmrMesh.H:396
void SetBlockingFactor(const Vector< IntVect > &new_bf)
Override per-level blocking factors using explicit IntVect vector new_bf.
Definition AMReX_AmrMesh.H:244
AmrMesh()
Construct an empty mesh.
Definition AMReX_AmrMesh.cpp:18
Vector< Geometry > geom
Definition AMReX_AmrMesh.H:437
const Vector< DistributionMapping > & DistributionMap() const noexcept
Definition AMReX_AmrMesh.H:165
int maxLevel() const noexcept
Return the max level.
Definition AMReX_AmrMesh.H:150
void SetIterateToFalse() noexcept
Disable the iterate-on-new-grids loop for the next MakeNewGrids call.
Definition AMReX_AmrMesh.H:459
unsigned int num_setdm
Definition AMReX_AmrMesh.H:446
bool useLegacyGridding() const noexcept
Use the original gridding rules unless no_box_split_dir is set.
Definition AMReX_AmrMesh.cpp:479
void SetBlockingFactor(const Vector< int > &new_bf) noexcept
Override per-level blocking factors using scalar-per-level vector new_bf.
Definition AMReX_AmrMesh.H:237
friend std::ostream & operator<<(std::ostream &os, AmrMesh const &amr_mesh)
Stream a summary of the mesh hierarchy (level extents, cell counts, etc.).
Definition AMReX_AmrMesh.cpp:1372
const BoxArray & boxArray(int lev) const noexcept
Definition AMReX_AmrMesh.H:170
IntVect effectiveMaxGridSize(int lev) const noexcept
Return the largest allowable grid at level lev, with the no_box_split_dir (if set) relaxed to the ext...
Definition AMReX_AmrMeshGridding.cpp:13
void SetBoxArray(int lev, const BoxArray &ba_in) noexcept
Install a BoxArray for level lev.
Definition AMReX_AmrMesh.cpp:418
const IntVect & nErrorBufVect(int lev) const noexcept
Return the number of buffer cells (as an IntVect) in error estimator.
Definition AMReX_AmrMesh.H:295
AmrMesh(AmrMesh &&rhs)=default
unsigned int num_setba
Definition AMReX_AmrMesh.H:447
void SetDistributionMap(int lev, const DistributionMapping &dmap_in) noexcept
Install a DistributionMapping for level lev.
Definition AMReX_AmrMesh.cpp:411
void SetMaxGridSize(int new_mgs) noexcept
Override the max grid size constraint for all levels (scalar version).
Definition AMReX_AmrMesh.H:205
bool LevelDefined(int lev) const noexcept
Return true if valid grids/dmaps exist for level lev.
Definition AMReX_AmrMesh.cpp:453
void SetUseNewChop() noexcept
Force MakeNewGrids to use the newer chopping algorithm.
Definition AMReX_AmrMesh.H:462
virtual void ManualTagsPlacement(int lev, TagBoxArray &tags, const Vector< IntVect > &bf_lev)
Manual tagging hook. Tags are defined on level lev grids coarsened by bf_lev[lev].
Definition AMReX_AmrMesh.H:407
const IntVect & blockingFactor(int lev) const noexcept
Return the blocking factor at level lev.
Definition AMReX_AmrMesh.H:304
Vector< DistributionMapping > DistributionMap(int a_coarsest_lev, int a_finest_lev) const noexcept
Definition AMReX_AmrMesh.H:188
Vector< Geometry > Geom(int a_coarsest_lev, int a_finest_lev) const noexcept
Definition AMReX_AmrMesh.H:172
int useFixedUpToLevel() const noexcept
Up to what level should we keep the coarser grids fixed (and not regrid those levels)?
Definition AMReX_AmrMesh.H:335
int finestLevel() const noexcept
Return the finest level.
Definition AMReX_AmrMesh.H:153
int GetLevel(Box const &domain) const noexcept
Given domain box, return AMR level. Return -1 if there is no match.
Definition AMReX_AmrMesh.cpp:431
void SetGridEff(Real eff) noexcept
Set the minimum acceptable grid efficiency to eff.
Definition AMReX_AmrMesh.H:250
int finest_level
Current finest level.
Definition AMReX_AmrMesh.H:436
Geometry & Geom(int lev) noexcept
Definition AMReX_AmrMesh.H:198
Real gridEff() const noexcept
Return the minimum allowable grid efficiency.
Definition AMReX_AmrMesh.H:298
IntVect refRatio(int lev) const noexcept
Return the refinement ratio for level lev.
Definition AMReX_AmrMesh.H:156
void ChopGrids(int lev, BoxArray &ba, int target_size) const
Try to chop grids on level lev until BoxArray ba has at least target_size boxes.
Definition AMReX_AmrMesh.cpp:491
int MaxRefRatio(int lev) const noexcept
Return the maximum refinement ratio in any direction.
Definition AMReX_AmrMesh.cpp:401
virtual ~AmrMesh()=default
void checkInput()
Validate AmrInfo inputs (throws if inconsistent).
Definition AMReX_AmrMesh.cpp:1221
IntVect bfLev(int lev) const noexcept
Return the factor by which the tags on level lev are coarsened before they are clustered into level l...
Definition AMReX_AmrMeshGridding.cpp:27
void SetMaxGridSize(const IntVect &new_mgs) noexcept
Override the max grid size constraint using explicit IntVect new_mgs.
Definition AMReX_AmrMesh.H:209
virtual BoxArray GetAreaNotToTag(int lev)
Return a BoxArray that should never be tagged on level lev (e.g., buffer zones).
Definition AMReX_AmrMesh.H:426
Vector< BoxArray > boxArray(int a_coarsest_lev, int a_finest_lev) const noexcept
Definition AMReX_AmrMesh.H:180
int Verbose() const noexcept
Definition AMReX_AmrMesh.H:147
int nProper() const noexcept
Return the number of cell blocks to define proper nesting.
Definition AMReX_AmrMesh.H:301
AmrMesh(const AmrMesh &rhs)=delete
void SetGeometry(int lev, const Geometry &geom_in) noexcept
Install a Geometry object for level lev.
Definition AMReX_AmrMesh.cpp:425
const DistributionMapping & DistributionMap(int lev) const noexcept
Definition AMReX_AmrMesh.H:169
void SetFinestLevel(int new_finest_level) noexcept
Update the recorded finest level index to new_finest_level (without reallocating).
Definition AMReX_AmrMesh.H:258
const IntVect & maxGridSize(int lev) const noexcept
Return the largest allowable grid.
Definition AMReX_AmrMesh.H:307
Vector< DistributionMapping > dmap
Definition AMReX_AmrMesh.H:438
void SetBlockingFactor(int new_bf) noexcept
Override the blocking factor constraint for all levels (scalar version).
Definition AMReX_AmrMesh.H:229
bool hasOddRefRatio(int lev) const noexcept
True if ref_ratio[lev] is odd (and not 1) in some direction.
Definition AMReX_AmrMesh.cpp:485
virtual DistributionMapping MakeDistributionMap(int lev, BoxArray const &ba)
Build a distribution map for level lev grid layout ba (override to customize load balancing).
Definition AMReX_AmrMesh.cpp:459
const Vector< IntVect > & refRatio() const noexcept
Return refinement ratios between all levels.
Definition AMReX_AmrMesh.H:162
const Vector< Geometry > & Geom() const noexcept
Definition AMReX_AmrMesh.H:164
BoxArray MakeBaseGrids() const
Make a level-0 BoxArray covering the whole domain (without installing it).
Definition AMReX_AmrMesh.cpp:550
void MakeNewGrids(int lbase, Real time, int &new_finest, Vector< BoxArray > &new_grids)
Make new grids based on error estimates. This function expects that valid BoxArrays exist in this->gr...
Definition AMReX_AmrMesh.cpp:580
Vector< Geometry > & Geom() noexcept
Definition AMReX_AmrMesh.H:197
int nErrorBuf(int lev, int direction=0) const noexcept
Return the number of buffer cells (as a single integer) in error estimator.
Definition AMReX_AmrMesh.H:292
void SetMaxGridSize(const Vector< IntVect > &new_mgs) noexcept
Override per-level max grid sizes using explicit IntVect-per-level vector new_mgs.
Definition AMReX_AmrMesh.H:220
virtual void PostProcessBaseGrids(BoxArray &box_array) const
Allow derived classes to edit the base-level grids before installing them.
Definition AMReX_AmrMesh.H:421
Long CountCells(int lev) const noexcept
Count the total number of cells at level lev.
Definition AMReX_AmrMesh.cpp:1367
void SetBlockingFactor(const IntVect &new_bf) noexcept
Override blocking factor using explicit IntVect new_bf.
Definition AMReX_AmrMesh.H:233
void SetMaxGridSize(const Vector< int > &new_mgs) noexcept
Override per-level max grid sizes using scalar-per-level vector new_mgs.
Definition AMReX_AmrMesh.H:213
Vector< BoxArray > grids
Definition AMReX_AmrMesh.H:439
AmrMesh & operator=(const AmrMesh &rhs)=delete
void SetNProper(int n) noexcept
Set the number of cell blocks required for proper nesting to n.
Definition AMReX_AmrMesh.H:253
bool useFixedCoarseGrids() const noexcept
Should we keep the coarser grids fixed (and not regrid those levels) at all?
Definition AMReX_AmrMesh.H:332
const Vector< BoxArray > & boxArray() const noexcept
Definition AMReX_AmrMesh.H:166
void ClearDistributionMap(int lev) noexcept
Clear the stored DistributionMapping for level lev.
Definition AMReX_AmrMesh.cpp:441
void ClearBoxArray(int lev) noexcept
Clear the stored BoxArray for level lev.
Definition AMReX_AmrMesh.cpp:447
Reference-counted collection of Boxes.
Definition AMReX_BoxArray.H:681
A list of Boxes sharing a common IndexType.
Definition AMReX_BoxList.H:109
Calculates the distribution of FABs to MPI processes.
Definition AMReX_DistributionMapping.H:51
Rectangular problem domain geometry.
Definition AMReX_Geometry.H:85
A Box with real dimensions.
Definition AMReX_RealBox.H:28
An array of TagBoxes.
Definition AMReX_TagBox.H:151
This class is a thin wrapper around std::vector. Unlike vector, Vector::operator[] provides bound che...
Definition AMReX_Vector.H:29
Long size() const noexcept
Definition AMReX_Vector.H:54
amrex_real Real
Floating Point Type for Fields.
Definition AMReX_REAL.H:80
amrex_long Long
Definition AMReX_INT.H:30
std::array< T, N > Array
Definition AMReX_Array.H:31
Definition AMReX_Amr.cpp:50
std::ostream & operator<<(std::ostream &os, AmrMesh const &amr_mesh)
Stream helper; forwards to the friend declared inside AmrMesh.
Definition AMReX_AmrMesh.cpp:1372
__host__ __device__ void ignore_unused(const Ts &...)
No-op helper that marks variables as intentionally unused.
Definition AMReX.H:259
IntVectND< 3 > IntVect
IntVect is an alias for amrex::IntVectND instantiated with AMREX_SPACEDIM.
Definition AMReX_BaseFwd.H:38
Definition AMReX_AmrMesh.H:25
int no_box_split_dir
Definition AMReX_AmrMesh.H:78
int n_proper
Cells required for proper nesting.
Definition AMReX_AmrMesh.H:44
bool refine_grid_layout
Definition AMReX_AmrMesh.H:52
bool use_fixed_coarse_grids
Definition AMReX_AmrMesh.H:46
Vector< IntVect > ref_ratio
Refinement ratios.
Definition AMReX_AmrMesh.H:30
bool use_new_chop
Definition AMReX_AmrMesh.H:69
Real grid_eff
Grid efficiency.
Definition AMReX_AmrMesh.H:42
int refine_whole_domain_dir
Definition AMReX_AmrMesh.H:66
bool iterate_on_new_grids
Definition AMReX_AmrMesh.H:70
int max_grid_iterations
Definition AMReX_AmrMesh.H:71
bool check_input
Definition AMReX_AmrMesh.H:68
Vector< IntVect > n_error_buf
Buffer cells around each tagged cell.
Definition AMReX_AmrMesh.H:40
int max_level
Maximum allowed level.
Definition AMReX_AmrMesh.H:28
IntVect refine_grid_layout_dims
Definition AMReX_AmrMesh.H:58
Vector< IntVect > max_grid_size
Maximum allowable grid size (by level).
Definition AMReX_AmrMesh.H:35
int use_fixed_upto_level
Definition AMReX_AmrMesh.H:45
int verbose
Definition AMReX_AmrMesh.H:26
Vector< IntVect > blocking_factor
Blocking factor in grid generation (by level).
Definition AMReX_AmrMesh.H:32