1#ifndef AMREX_PARTICLETILE_H_
2#define AMREX_PARTICLETILE_H_
3#include <AMReX_Config.H>
22template <
int NArrayReal,
int NArrayInt>
23struct ConstSoAParticle;
24template <
int NArrayReal,
int NArrayInt>
27template <
typename T_ParticleType,
int NArrayReal,
int NArrayInt>
28struct ConstParticleTileData;
31template <
typename T_ParticleType,
int NArrayReal,
int NArrayInt>
34 static constexpr int NAR = NArrayReal;
35 static constexpr int NAI = NArrayInt;
52 using AOS_PTR = std::conditional_t<T_ParticleType::is_soa_particle,
66 decltype(
auto)
pos (
const int dir,
const int index)
const &
68 if constexpr(!ParticleType::is_soa_particle) {
69 return this->m_aos[index].pos(dir);
71 return this->m_rdata[dir][index];
76 decltype(
auto)
id (
const int index)
const &
78 if constexpr(!ParticleType::is_soa_particle) {
79 return this->m_aos[index].id();
86 decltype(
auto)
cpu (
const int index)
const &
88 if constexpr(!ParticleType::is_soa_particle) {
89 return this->m_aos[index].cpu();
96 decltype(
auto)
idcpu (
const int index)
const &
98 if constexpr(ParticleType::is_soa_particle) {
99 return this->m_idcpu[index];
101 return this->m_aos[index].idcpu();
108 return this->m_rdata[attribute_index];
112 int *
idata (
const int attribute_index)
const
114 return this->m_idata[attribute_index];
118 decltype(
auto)
operator[] (
const int index)
const
120 if constexpr (!ParticleType::is_soa_particle) {
129 const int* comm_real,
const int * comm_int)
const noexcept
132 auto* dst = buffer + dst_offset;
133 if constexpr (!ParticleType::is_soa_particle) {
137 memcpy(dst,
m_idcpu + src_index,
sizeof(uint64_t));
138 dst +=
sizeof(uint64_t);
140 int array_start_index = 0;
141 if constexpr (!ParticleType::is_soa_particle) {
144 for (
int i = 0; i <
NAR; ++i)
146 if (comm_real[array_start_index + i])
152 int runtime_start_index = array_start_index +
NAR;
155 if (comm_real[runtime_start_index + i])
162 for (
int i = 0; i <
NAI; ++i)
164 if (comm_int[array_start_index + i])
166 memcpy(dst,
m_idata[i] + src_index,
sizeof(
int));
173 if (comm_int[runtime_start_index + i])
183 const int* comm_real,
const int* comm_int)
const noexcept
186 const auto* src = buffer + src_offset;
187 if constexpr (!ParticleType::is_soa_particle) {
191 memcpy(
m_idcpu + dst_index, src,
sizeof(uint64_t));
192 src +=
sizeof(uint64_t);
194 int array_start_index = 0;
195 if constexpr (!ParticleType::is_soa_particle) {
198 if constexpr (
NAR > 0) {
199 for (
int i = 0; i <
NAR; ++i)
201 if (comm_real[array_start_index + i])
208 int runtime_start_index = array_start_index +
NAR;
211 if (comm_real[runtime_start_index + i])
218 if constexpr (
NAI > 0) {
219 for (
int i = 0; i <
NAI; ++i)
221 if (comm_int[array_start_index + i])
223 memcpy(
m_idata[i] + dst_index, src,
sizeof(
int));
231 if (comm_int[runtime_start_index + i])
239 template <
typename T = ParticleType, std::enable_if_t<!T::is_soa_particle,
int> = 0>
245 for (
int i = 0; i < AMREX_SPACEDIM; ++i) {
251 if constexpr (
NAR >0) {
252 for (
int i = 0; i <
NAR; ++i) {
261 if constexpr (
NAI > 0) {
262 for (
int i = 0; i <
NAI; ++i) {
269 template <
typename T = ParticleType, std::enable_if_t<T::is_soa_particle,
int> = 0>
276 for (
int i = 0; i < AMREX_SPACEDIM; ++i) {sp.
pos(i) =
m_rdata[i][index];}
277 for (
int i = 0; i <
NAR; ++i) {
280 for (
int i = 0; i <
NAI; ++i) {
286 template <
typename T = ParticleType, std::enable_if_t<!T::is_soa_particle,
int> = 0>
290 for (
int i = 0; i < AMREX_SPACEDIM; ++i) {
291 m_aos[index].pos(i) = sp.pos(i);
294 m_aos[index].rdata(i) = sp.rdata(i);
296 for (
int i = 0; i <
NAR; ++i) {
299 m_aos[index].id() = sp.id();
300 m_aos[index].cpu() = sp.cpu();
302 m_aos[index].idata(i) = sp.idata(i);
304 for (
int i = 0; i <
NAI; ++i) {
309 template <
typename T = ParticleType, std::enable_if_t<T::is_soa_particle,
int> = 0>
314 for (
int i = 0; i <
NAR; ++i) {
315 m_rdata[i][index] = sp.rdata(i);
317 for (
int i = 0; i <
NAI; ++i) {
318 m_idata[i][index] = sp.idata(i);
324template <
int T_NArrayReal,
int T_NArrayInt>
340 m_constparticle_tile_data(ptd), m_index(
int(i))
357 RealVect pos () const & {
return RealVect(
AMREX_D_DECL(this->m_constparticle_tile_data.
m_rdata[0][m_index], this->m_constparticle_tile_data.m_rdata[1][m_index], this->m_constparticle_tile_data.m_rdata[2][m_index]));}
363 return this->m_constparticle_tile_data.
m_rdata[position_index][m_index];
382 static_assert(std::is_trivially_copyable<ConstPTD>(),
"ParticleTileData is not trivially copyable");
388template <
int T_NArrayReal,
int T_NArrayInt>
405 m_particle_tile_data(ptd), m_index(
int(i))
420 uint64_t&
idcpu () & {
return this->m_particle_tile_data.
m_idcpu[m_index]; }
429 const uint64_t&
idcpu () const & {
return this->m_particle_tile_data.
m_idcpu[m_index]; }
440 return this->m_particle_tile_data.
m_rdata[position_index][m_index];
447 return this->m_particle_tile_data.
m_rdata[position_index][m_index];
466 static_assert(std::is_trivially_copyable<PTD>(),
"ParticleTileData is not trivially copyable");
468 PTD m_particle_tile_data;
475template <
int NArrayReal,
int NArrayInt>
482#if defined(AMREX_USE_OMP) && defined(_OPENMP) && _OPENMP < 201307
483#pragma omp critical (amrex_particle_nextid)
484#elif defined(AMREX_USE_OMP)
485#pragma omp atomic capture
487 next = the_next_id++;
490 amrex::Abort(
"SoAParticle<NArrayReal, NArrayInt>::NextID() -- too many particles");
496template <
int NArrayReal,
int NArrayInt>
500 Long next = the_next_id++;
502 amrex::Abort(
"SoAParticle<NArrayReal, NArrayInt>::NextID() -- too many particles");
507template <
int NArrayReal,
int NArrayInt>
511 the_next_id = nextid;
514template <
typename T_ParticleType,
int NArrayReal,
int NArrayInt>
517 static constexpr int NAR = NArrayReal;
518 static constexpr int NAI = NArrayInt;
533 using AOS_PTR = std::conditional_t<T_ParticleType::is_soa_particle,
542 decltype(
auto)
pos (
const int dir,
const int index)
const &
544 if constexpr(!ParticleType::is_soa_particle) {
545 return this->m_aos[index].pos(dir);
547 return this->m_rdata[dir][index];
552 decltype(
auto)
id (
const int index)
const &
554 if constexpr(!ParticleType::is_soa_particle) {
555 return this->m_aos[index].id();
562 decltype(
auto)
cpu (
const int index)
const &
564 if constexpr(!ParticleType::is_soa_particle) {
565 return this->m_aos[index].cpu();
572 decltype(
auto)
idcpu (
const int index)
const &
574 if constexpr(ParticleType::is_soa_particle) {
575 return this->m_idcpu[index];
577 return this->m_aos[index].idcpu();
584 return this->m_rdata[attribute_index];
588 const int *
idata (
const int attribute_index)
const
590 return this->m_idata[attribute_index];
594 decltype(
auto)
operator[] (
const int index)
const
596 if constexpr (!ParticleType::is_soa_particle) {
610 const int* comm_real,
const int * comm_int)
const noexcept
613 auto* dst = buffer + dst_offset;
614 if constexpr (!ParticleType::is_soa_particle) {
618 memcpy(dst,
m_idcpu + src_index,
sizeof(uint64_t));
619 dst +=
sizeof(uint64_t);
621 int array_start_index = 0;
622 if constexpr (!ParticleType::is_soa_particle) {
625 if constexpr (NArrayReal > 0) {
626 for (
int i = 0; i < NArrayReal; ++i)
628 if (comm_real[array_start_index + i])
635 int runtime_start_index = array_start_index + NArrayReal;
638 if (comm_real[runtime_start_index + i])
645 if constexpr (NArrayInt > 0) {
646 for (
int i = 0; i < NArrayInt; ++i)
648 if (comm_int[array_start_index + i])
650 memcpy(dst,
m_idata[i] + src_index,
sizeof(
int));
655 runtime_start_index = 2 +
NStructInt + NArrayInt;
658 if (comm_int[runtime_start_index + i])
666 template <
typename T = ParticleType, std::enable_if_t<!T::is_soa_particle,
int> = 0>
672 for (
int i = 0; i < AMREX_SPACEDIM; ++i) {
678 if constexpr(NArrayReal > 0) {
679 for (
int i = 0; i < NArrayReal; ++i) {
688 if constexpr(NArrayInt > 0) {
689 for (
int i = 0; i < NArrayInt; ++i) {
696 template <
typename T = ParticleType, std::enable_if_t<T::is_soa_particle,
int> = 0>
702 for (
int i = 0; i < AMREX_SPACEDIM; ++i) {sp.
pos(i) =
m_rdata[i][index];}
704 for (
int i = 0; i <
NAR; ++i) {
707 for (
int i = 0; i <
NAI; ++i) {
720template <
typename T_ParticleType,
int NArrayReal,
int NArrayInt,
724 template <
typename T>
728 static constexpr int NAR = NArrayReal;
729 static constexpr int NAI = NArrayInt;
737 using AoS = std::conditional_t<
738 ParticleType::is_soa_particle,
743 using SoA = std::conditional_t<
744 ParticleType::is_soa_particle,
770 int a_num_runtime_real,
771 int a_num_runtime_int,
772 std::vector<std::string>* soa_rdata_names=
nullptr,
773 std::vector<std::string>* soa_idata_names=
nullptr,
774 Arena* a_arena=
nullptr
777 GetStructOfArrays().define(a_num_runtime_real, a_num_runtime_int, soa_rdata_names, soa_idata_names);
778 m_runtime_r_ptrs.resize(a_num_runtime_real);
779 m_runtime_i_ptrs.resize(a_num_runtime_int);
780 m_runtime_r_cptrs.resize(a_num_runtime_real);
781 m_runtime_i_cptrs.resize(a_num_runtime_int);
786 if constexpr (ParticleType::is_soa_particle) {
789 "ParticleTile with PolymorphicArenaAllocator redefined with "
790 "different memory arena");
793 a_arena == m_aos_tile().arena(),
794 "ParticleTile with PolymorphicArenaAllocator redefined with "
795 "different memory arena");
800 "ParticleTile with PolymorphicArenaAllocator defined with no memory arena! "
801 "Make sure to call setArena() on the ParticleContainer before initialization or "
802 "to pass an Arena to ParticleTile::define()");
804 if constexpr (ParticleType::is_soa_particle) {
807 m_aos_tile().setArena(a_arena);
821 decltype(
auto)
id (
int index) & {
822 if constexpr (!ParticleType::is_soa_particle) {
823 return m_aos_tile[index].id();
830 decltype(
auto)
id (
int index)
const & {
831 if constexpr (!ParticleType::is_soa_particle) {
832 return m_aos_tile[index].id();
839 decltype(
auto)
cpu (
int index) & {
840 if constexpr (!ParticleType::is_soa_particle) {
841 return m_aos_tile[index].cpu();
848 decltype(
auto)
cpu (
int index)
const & {
849 if constexpr (!ParticleType::is_soa_particle) {
850 return m_aos_tile[index].cpu();
858 if constexpr (!ParticleType::is_soa_particle) {
859 return m_aos_tile[index].pos(position_index);
861 static_assert(NArrayReal == ParticleType::PTD::NAR,
"ParticleTile mismatch in R");
862 static_assert(NArrayInt == ParticleType::PTD::NAI,
"ParticleTile mismatch in I");
863 static_assert(0 == ParticleType::StorageParticleType::NReal,
"ParticleTile 2 mismatch in R");
864 static_assert(0 == ParticleType::StorageParticleType::NInt,
"ParticleTile 2 mismatch in I");
866 return m_soa_tile.GetRealData(position_index)[index];
873 if constexpr (!ParticleType::is_soa_particle) {
874 return m_aos_tile[index].pos(position_index);
876 return m_soa_tile.GetRealData(position_index)[index];
894 if constexpr (!ParticleType::is_soa_particle) {
895 return m_aos_tile.size();
897 return m_soa_tile.size();
907 if constexpr (!ParticleType::is_soa_particle) {
908 return m_aos_tile.numParticles();
910 return m_soa_tile.numParticles();
920 if constexpr (!ParticleType::is_soa_particle) {
921 return m_aos_tile.numRealParticles();
923 return m_soa_tile.numRealParticles();
933 if constexpr (!ParticleType::is_soa_particle) {
934 return m_aos_tile.numNeighborParticles();
936 return m_soa_tile.numNeighborParticles();
946 if constexpr (!ParticleType::is_soa_particle) {
947 return m_aos_tile.numTotalParticles();
949 return m_soa_tile.numTotalParticles();
955 if constexpr(!ParticleType::is_soa_particle) {
956 m_aos_tile.setNumNeighbors(num_neighbors);
958 m_soa_tile.setNumNeighbors(num_neighbors);
963 if constexpr (!ParticleType::is_soa_particle) {
964 AMREX_ASSERT( m_soa_tile.getNumNeighbors() == m_aos_tile.getNumNeighbors() );
965 return m_aos_tile.getNumNeighbors();
967 return m_soa_tile.getNumNeighbors();
973 if constexpr (!ParticleType::is_soa_particle) {
974 m_aos_tile.resize(count, strategy);
976 m_soa_tile.resize(count, strategy);
981 if constexpr (!ParticleType::is_soa_particle) {
982 m_aos_tile.reserve(
capacity, strategy);
984 m_soa_tile.reserve(
capacity, strategy);
990 template <
typename T = ParticleType, std::enable_if_t<!T::is_soa_particle,
int> = 0>
996 template <
int NR = NArrayReal,
int NI = NArrayInt,
997 std::enable_if_t<NR != 0 || NI != 0, int> foo = 0>
1002 if constexpr (!ParticleType::is_soa_particle) {
1003 m_aos_tile.resize(np+1);
1004 for (
int i = 0; i < AMREX_SPACEDIM; ++i) {
1005 m_aos_tile[np].pos(i) = sp.
pos(i);
1008 m_aos_tile[np].rdata(i) = sp.
rdata(i);
1010 m_aos_tile[np].id() = sp.
id();
1011 m_aos_tile[np].cpu() = sp.
cpu();
1013 m_aos_tile[np].idata(i) = sp.
idata(i);
1017 m_soa_tile.resize(np+1);
1018 if constexpr (ParticleType::is_soa_particle) {
1019 m_soa_tile.GetIdCPUData()[np] = sp.
m_idcpu;
1021 auto& arr_rdata = m_soa_tile.GetRealData();
1022 auto& arr_idata = m_soa_tile.GetIntData();
1023 for (
int i = 0; i < NArrayReal; ++i) {
1026 for (
int i = 0; i < NArrayInt; ++i) {
1036 m_soa_tile.GetRealData(comp).push_back(v);
1044 for (
int i = 0; i < NArrayReal; ++i) {
1045 m_soa_tile.GetRealData(i).push_back(v[i]);
1054 auto it = m_soa_tile.GetRealData(comp).end();
1055 m_soa_tile.GetRealData(comp).insert(it, beg,
end);
1079 auto new_size = m_soa_tile.GetRealData(comp).size() + npar;
1080 m_soa_tile.GetRealData(comp).resize(new_size, v);
1088 m_soa_tile.GetIntData(comp).push_back(v);
1096 for (
int i = 0; i < NArrayInt; ++i) {
1097 m_soa_tile.GetIntData(i).push_back(v[i]);
1106 auto it = m_soa_tile.GetIntData(comp).end();
1107 m_soa_tile.GetIntData(comp).insert(it, beg,
end);
1131 auto new_size = m_soa_tile.GetIntData(comp).size() + npar;
1132 m_soa_tile.GetIntData(comp).resize(new_size, v);
1137 int NumIntComps () const noexcept {
return m_soa_tile.NumIntComps(); }
1145 if constexpr (ParticleType::is_soa_particle) {
1148 m_aos_tile().shrink_to_fit();
1153 rdata.shrink_to_fit();
1159 idata.shrink_to_fit();
1166 if constexpr (ParticleType::is_soa_particle) {
1169 nbytes += m_aos_tile().capacity() *
sizeof(
ParticleType);
1180 nbytes += idata.capacity()*
sizeof(
int);
1187 if constexpr (ParticleType::is_soa_particle) {
1188 GetStructOfArrays().GetIdCPUData().swap(other.GetStructOfArrays().GetIdCPUData());
1190 m_aos_tile().swap(other.GetArrayOfStructs()());
1195 rdata.swap(other.GetStructOfArrays().GetRealData(j));
1201 idata.swap(other.GetStructOfArrays().GetIntData(j));
1207 m_runtime_r_ptrs.resize(m_soa_tile.NumRealComps() - NArrayReal);
1208 m_runtime_i_ptrs.resize(m_soa_tile.NumIntComps() - NArrayInt);
1210 bool copy_real =
false;
1211 m_h_runtime_r_ptrs.resize(m_soa_tile.NumRealComps() - NArrayReal,
nullptr);
1212 for (std::size_t i = 0; i < m_h_runtime_r_ptrs.size(); ++i) {
1213 if (m_h_runtime_r_ptrs[i] != m_soa_tile.GetRealData(i + NArrayReal).dataPtr()) {
1214 m_h_runtime_r_ptrs[i] = m_soa_tile.GetRealData(i + NArrayReal).dataPtr();
1223 bool copy_int =
false;
1224 m_h_runtime_i_ptrs.resize(m_soa_tile.NumIntComps() - NArrayInt,
nullptr);
1225 for (std::size_t i = 0; i < m_h_runtime_i_ptrs.size(); ++i) {
1226 if (m_h_runtime_i_ptrs[i] != m_soa_tile.GetIntData(i + NArrayInt).dataPtr()) {
1227 m_h_runtime_i_ptrs[i] = m_soa_tile.GetIntData(i + NArrayInt).dataPtr();
1233 m_h_runtime_i_ptrs.size()*
sizeof(
int*));
1236 for (std::size_t i = 0; i < m_runtime_r_ptrs.size(); ++i) {
1237 m_runtime_r_ptrs[i] = m_soa_tile.GetRealData(i + NArrayReal).dataPtr();
1240 for (std::size_t i = 0; i < m_runtime_i_ptrs.size(); ++i) {
1241 m_runtime_i_ptrs[i] = m_soa_tile.GetIntData(i + NArrayInt).dataPtr();
1246 if constexpr (!ParticleType::is_soa_particle) {
1247 ptd.
m_aos = m_aos_tile().dataPtr();
1249 ptd.
m_aos =
nullptr;
1251 if constexpr (ParticleType::is_soa_particle) {
1252 ptd.
m_idcpu = m_soa_tile.GetIdCPUData().dataPtr();
1256 if constexpr(NArrayReal > 0) {
1257 for (
int i = 0; i < NArrayReal; ++i) {
1258 ptd.
m_rdata[i] = m_soa_tile.GetRealData(i).dataPtr();
1261 if constexpr(NArrayInt > 0) {
1262 for (
int i = 0; i < NArrayInt; ++i) {
1263 ptd.
m_idata[i] = m_soa_tile.GetIntData(i).dataPtr();
1273 if (copy_real || copy_int) {
1283 m_runtime_r_cptrs.resize(m_soa_tile.NumRealComps() - NArrayReal);
1284 m_runtime_i_cptrs.resize(m_soa_tile.NumIntComps() - NArrayInt);
1286 bool copy_real =
false;
1287 m_h_runtime_r_cptrs.resize(m_soa_tile.NumRealComps() - NArrayReal,
nullptr);
1288 for (std::size_t i = 0; i < m_h_runtime_r_cptrs.size(); ++i) {
1289 if (m_h_runtime_r_cptrs[i] != m_soa_tile.GetRealData(i + NArrayReal).dataPtr()) {
1290 m_h_runtime_r_cptrs[i] = m_soa_tile.GetRealData(i + NArrayReal).dataPtr();
1299 bool copy_int =
false;
1300 m_h_runtime_i_cptrs.resize(m_soa_tile.NumIntComps() - NArrayInt,
nullptr);
1301 for (std::size_t i = 0; i < m_h_runtime_i_cptrs.size(); ++i) {
1302 if (m_h_runtime_i_cptrs[i] != m_soa_tile.GetIntData(i + NArrayInt).dataPtr()) {
1303 m_h_runtime_i_cptrs[i] = m_soa_tile.GetIntData(i + NArrayInt).dataPtr();
1309 m_h_runtime_i_cptrs.size()*
sizeof(
int*));
1312 for (std::size_t i = 0; i < m_runtime_r_cptrs.size(); ++i) {
1313 m_runtime_r_cptrs[i] = m_soa_tile.GetRealData(i + NArrayReal).dataPtr();
1316 for (std::size_t i = 0; i < m_runtime_i_cptrs.size(); ++i) {
1317 m_runtime_i_cptrs[i] = m_soa_tile.GetIntData(i + NArrayInt).dataPtr();
1322 if constexpr (!ParticleType::is_soa_particle) {
1323 ptd.
m_aos = m_aos_tile().dataPtr();
1325 ptd.
m_aos =
nullptr;
1327 if constexpr (ParticleType::is_soa_particle) {
1328 ptd.
m_idcpu = m_soa_tile.GetIdCPUData().dataPtr();
1332 if constexpr(NArrayReal > 0) {
1333 for (
int i = 0; i < NArrayReal; ++i) {
1334 ptd.
m_rdata[i] = m_soa_tile.GetRealData(i).dataPtr();
1337 if constexpr(NArrayInt > 0) {
1338 for (
int i = 0; i < NArrayInt; ++i) {
1339 ptd.
m_idata[i] = m_soa_tile.GetIntData(i).dataPtr();
1349 if (copy_real || copy_int) {
1361 if constexpr (!ParticleType::is_soa_particle) {
1362 m_aos_tile.collectVectors(pv);
1366 m_soa_tile.collectVectors(idcpuv, rv, iv);
1372 for (
auto [p,s] : addsizes) {
1373 p->reserve(p->size()+s);
1376 using PV = std::conditional_t<ParticleType::is_soa_particle,
1382 for (
auto [p,s] : addsizes) {
1388 p->collectVectors(pv, idcpuv, rv, iv);
1389 if constexpr (!ParticleType::is_soa_particle) {
1390 for (
auto* v : pv) {
1391 pvs.emplace_back(v, s);
1394 for (
auto* v : idcpuv) {
1395 ids.emplace_back(v, s);
1397 for (
auto* v : rv) {
1398 rvs.emplace_back(v, s);
1400 for (
auto* v : iv) {
1401 ivs.emplace_back(v, s);
1406 std::sort(pvs.begin(), pvs.end(), [] (
auto const& a,
auto const& b) {
1407 return (a.first->size() + a.second) >
1408 (b.first->size() + b.second);
1410 std::sort(ids.begin(), ids.end(), [] (
auto const& a,
auto const& b) {
1411 return (a.first->size() + a.second) >
1412 (b.first->size() + b.second);
1414 std::sort(rvs.begin(), rvs.end(), [] (
auto const& a,
auto const& b) {
1415 return (a.first->size() + a.second) >
1416 (b.first->size() + b.second);
1418 std::sort(ivs.begin(), ivs.end(), [] (
auto const& a,
auto const& b) {
1419 return (a.first->size() + a.second) >
1420 (b.first->size() + b.second);
1425 int i_pvs = 0, i_ids = 0, i_rvs = 0, i_ivs = 0;
1430 while ((i_pvs < n_pvs) || (i_ids < n_ids) || (i_rvs < n_rvs) ||
1432 std::size_t nbytes = 0;
1434 if (i_pvs < n_pvs) {
1435 std::size_t my_bytes = (pvs[i_pvs].first->
size()
1436 + pvs[i_pvs].second) *
sizeof(
typename PV::value_type);
1437 if (my_bytes > nbytes) {
1442 if (i_ids < n_ids) {
1443 std::size_t my_bytes = (ids[i_ids].first->
size()
1444 + ids[i_ids].second) *
sizeof(
typename SoA::IdCPU::value_type);
1445 if (my_bytes > nbytes) {
1450 if (i_rvs < n_rvs) {
1451 std::size_t my_bytes = (rvs[i_rvs].first->
size()
1452 + rvs[i_rvs].second) *
sizeof(
typename RealVector::value_type);
1453 if (my_bytes > nbytes) {
1458 if (i_ivs < n_ivs) {
1459 std::size_t my_bytes = (ivs[i_ivs].first->
size()
1460 + ivs[i_ivs].second) *
sizeof(
typename IntVector::value_type);
1461 if (my_bytes > nbytes) {
1467 auto [p,s] = pvs[i_pvs++];
1468 p->reserve(p->size() + s);
1469 }
else if (ii == 1) {
1470 auto [p,s] = ids[i_ids++];
1471 p->reserve(p->size() + s);
1472 }
else if (ii == 2) {
1473 auto [p,s] = rvs[i_rvs++];
1474 p->reserve(p->size() + s);
1476 auto [p,s] = ivs[i_ivs++];
1477 p->reserve(p->size() + s);
1489 bool m_defined =
false;
#define AMREX_ALWAYS_ASSERT_WITH_MESSAGE(EX, MSG)
Definition AMReX_BLassert.H:49
#define AMREX_ASSERT(EX)
Definition AMReX_BLassert.H:38
#define AMREX_FORCE_INLINE
Definition AMReX_Extension.H:119
#define AMREX_RESTRICT
Definition AMReX_Extension.H:32
#define AMREX_GPU_HOST_DEVICE
Definition AMReX_GpuQualifiers.H:20
#define AMREX_D_DECL(a, b, c)
Definition AMReX_SPACE.H:171
Definition AMReX_GpuAllocators.H:121
A virtual base class for objects that manage their own dynamic memory allocation.
Definition AMReX_Arena.H:132
Definition AMReX_ArrayOfStructs.H:13
Dynamically allocated vector for trivially copyable data.
Definition AMReX_PODVector.H:308
This class is a thin wrapper around std::vector. Unlike vector, Vector::operator[] provides bound che...
Definition AMReX_Vector.H:28
Long size() const noexcept
Definition AMReX_Vector.H:53
amrex_particle_real ParticleReal
Floating Point Type for Particles.
Definition AMReX_REAL.H:90
amrex_long Long
Definition AMReX_INT.H:30
void streamSynchronize() noexcept
Definition AMReX_GpuDevice.H:310
void htod_memcpy_async(void *p_d, const void *p_h, const std::size_t sz) noexcept
Definition AMReX_GpuDevice.H:421
constexpr Long LastParticleID
Definition AMReX_Particle.H:21
Definition AMReX_Amr.cpp:49
__host__ __device__ void ignore_unused(const Ts &...)
This shuts up the compiler about unused variables.
Definition AMReX.H:139
GrowthStrategy
Definition AMReX_PODVector.H:250
RealVectND< 3 > RealVect
Definition AMReX_ParmParse.H:35
void Abort(const std::string &msg)
Print out message to cerr and exit via abort().
Definition AMReX.cpp:240
const int[]
Definition AMReX_BLProfiler.cpp:1664
__host__ __device__ Dim3 end(BoxND< dim > const &box) noexcept
Definition AMReX_Box.H:2015
Definition AMReX_Particle.H:327
Definition AMReX_Particle.H:301
static constexpr bool is_particle_tile_data
Definition AMReX_ParticleTile.H:529
static constexpr int NAI
Definition AMReX_ParticleTile.H:518
int IntType
Definition AMReX_ParticleTile.H:522
GpuArray< const int *, NArrayInt > m_idata
Definition AMReX_ParticleTile.H:539
__host__ __device__ decltype(auto) idcpu(const int index) const &
Definition AMReX_ParticleTile.H:572
__host__ __device__ const int * idata(const int attribute_index) const
Definition AMReX_ParticleTile.H:588
Long m_size
Definition AMReX_ParticleTile.H:531
T_ParticleType ParticleType
Definition AMReX_ParticleTile.H:519
static constexpr int NStructReal
Definition AMReX_ParticleTile.H:524
__host__ __device__ void packParticleData(char *buffer, int src_index, Long dst_offset, const int *comm_real, const int *comm_int) const noexcept
Definition AMReX_ParticleTile.H:609
int m_num_runtime_real
Definition AMReX_ParticleTile.H:603
static constexpr int NStructInt
Definition AMReX_ParticleTile.H:525
const int *__restrict__ *__restrict__ m_runtime_idata
Definition AMReX_ParticleTile.H:606
ParticleReal RealType
Definition AMReX_ParticleTile.H:521
__host__ __device__ decltype(auto) pos(const int dir, const int index) const &
Definition AMReX_ParticleTile.H:542
__host__ __device__ decltype(auto) cpu(const int index) const &
Definition AMReX_ParticleTile.H:562
int m_num_runtime_int
Definition AMReX_ParticleTile.H:604
std::conditional_t< T_ParticleType::is_soa_particle, void const *__restrict__, ParticleType const *__restrict__ > AOS_PTR
Definition AMReX_ParticleTile.H:534
T_ParticleType const & ParticleRefType
Definition AMReX_ParticleTile.H:520
static constexpr int NAR
Definition AMReX_ParticleTile.H:517
AOS_PTR m_aos
Definition AMReX_ParticleTile.H:535
const uint64_t * m_idcpu
Definition AMReX_ParticleTile.H:537
__host__ __device__ SuperParticleType getSuperParticle(int index) const noexcept
Definition AMReX_ParticleTile.H:668
__host__ __device__ const ParticleReal * rdata(const int attribute_index) const
Definition AMReX_ParticleTile.H:582
GpuArray< const ParticleReal *, NArrayReal > m_rdata
Definition AMReX_ParticleTile.H:538
const ParticleReal *__restrict__ *__restrict__ m_runtime_rdata
Definition AMReX_ParticleTile.H:605
Definition AMReX_ParticleTile.H:326
__host__ __device__ ConstParticleIDWrapper id() const
Definition AMReX_ParticleTile.H:352
static constexpr int NArrayReal
Definition AMReX_ParticleTile.H:327
ParticleReal RealType
Definition AMReX_ParticleTile.H:335
__host__ __device__ ConstSoAParticle(ConstPTD const &ptd, long i)
Definition AMReX_ParticleTile.H:339
static constexpr int NArrayInt
Definition AMReX_ParticleTile.H:328
static constexpr bool is_rtsoa_particle
Definition AMReX_ParticleTile.H:332
static void NextID(Long nextid)
Reset on restart.
static constexpr bool is_constsoa_particle
Definition AMReX_ParticleTile.H:333
static Long UnprotectedNextID()
This version can only be used inside omp critical.
__host__ __device__ const RealType & pos(int position_index) const &
Definition AMReX_ParticleTile.H:360
__host__ __device__ RealVect pos() const &
Definition AMReX_ParticleTile.H:357
__host__ __device__ ConstParticleCPUWrapper cpu() const
Definition AMReX_ParticleTile.H:349
int IntType
Definition AMReX_ParticleTile.H:336
Fixed-size array that can be used on GPU.
Definition AMReX_Array.H:43
Definition AMReX_GpuAllocators.H:173
Definition AMReX_GpuAllocators.H:184
uint64_t m_idcpu
Definition AMReX_Particle.H:359
Definition AMReX_Particle.H:259
Definition AMReX_Particle.H:154
Definition AMReX_ParticleTile.H:33
__host__ __device__ SuperParticleType getSuperParticle(int index) const noexcept
Definition AMReX_ParticleTile.H:241
T_ParticleType & ParticleRefType
Definition AMReX_ParticleTile.H:38
__host__ __device__ decltype(auto) cpu(const int index) const &
Definition AMReX_ParticleTile.H:86
uint64_t * m_idcpu
Definition AMReX_ParticleTile.H:56
GpuArray< ParticleReal *, NAR > m_rdata
Definition AMReX_ParticleTile.H:57
__host__ __device__ void unpackParticleData(const char *buffer, Long src_offset, int dst_index, const int *comm_real, const int *comm_int) const noexcept
Definition AMReX_ParticleTile.H:182
__host__ __device__ decltype(auto) idcpu(const int index) const &
Definition AMReX_ParticleTile.H:96
__host__ __device__ ParticleReal * rdata(const int attribute_index) const
Definition AMReX_ParticleTile.H:106
__host__ __device__ void packParticleData(char *buffer, int src_index, std::size_t dst_offset, const int *comm_real, const int *comm_int) const noexcept
Definition AMReX_ParticleTile.H:128
static constexpr int NStructInt
Definition AMReX_ParticleTile.H:44
GpuArray< int *, NAI > m_idata
Definition AMReX_ParticleTile.H:58
ParticleReal RealType
Definition AMReX_ParticleTile.H:40
__host__ __device__ decltype(auto) pos(const int dir, const int index) const &
Definition AMReX_ParticleTile.H:66
T_ParticleType ParticleType
Definition AMReX_ParticleTile.H:37
std::conditional_t< T_ParticleType::is_soa_particle, void *__restrict__, ParticleType *__restrict__ > AOS_PTR
Definition AMReX_ParticleTile.H:53
int m_num_runtime_int
Definition AMReX_ParticleTile.H:61
Long m_size
Definition AMReX_ParticleTile.H:50
static constexpr int NAR
Definition AMReX_ParticleTile.H:34
int IntType
Definition AMReX_ParticleTile.H:41
ParticleReal *__restrict__ *__restrict__ m_runtime_rdata
Definition AMReX_ParticleTile.H:62
int m_num_runtime_real
Definition AMReX_ParticleTile.H:60
static constexpr bool is_particle_tile_data
Definition AMReX_ParticleTile.H:48
__host__ __device__ int * idata(const int attribute_index) const
Definition AMReX_ParticleTile.H:112
AOS_PTR m_aos
Definition AMReX_ParticleTile.H:54
static constexpr int NAI
Definition AMReX_ParticleTile.H:35
int *__restrict__ *__restrict__ m_runtime_idata
Definition AMReX_ParticleTile.H:63
__host__ __device__ void setSuperParticle(const SuperParticleType &sp, int index) const noexcept
Definition AMReX_ParticleTile.H:288
static constexpr int NStructReal
Definition AMReX_ParticleTile.H:43
Definition AMReX_ParticleTile.H:723
typename ParticleType::StorageParticleType StorageParticleType
Definition AMReX_ParticleTile.H:749
int NumRealComps() const noexcept
Definition AMReX_ParticleTile.H:1135
void push_back_real(int comp, amrex::Vector< amrex::ParticleReal > const &vec)
Definition AMReX_ParticleTile.H:1070
int NumIntComps() const noexcept
Definition AMReX_ParticleTile.H:1137
typename ParticleType::RealType RealType
Definition AMReX_ParticleTile.H:730
int getNumNeighbors() const
Definition AMReX_ParticleTile.H:961
typename AoS::ParticleVector ParticleVector
Definition AMReX_ParticleTile.H:741
void push_back(const ParticleType &p)
Definition AMReX_ParticleTile.H:991
ParticleTile(ParticleTile const &)=delete
std::conditional_t< ParticleType::is_soa_particle, StructOfArrays< NArrayReal, NArrayInt, Allocator, true >, StructOfArrays< NArrayReal, NArrayInt, Allocator, false > > SoA
Definition AMReX_ParticleTile.H:746
const SoA & GetStructOfArrays() const
Definition AMReX_ParticleTile.H:884
static constexpr int NAI
Definition AMReX_ParticleTile.H:729
ParticleTile(ParticleTile &&) noexcept=default
void push_back_real(int comp, const ParticleReal *beg, const ParticleReal *end)
Definition AMReX_ParticleTile.H:1053
static constexpr int NStructInt
Definition AMReX_ParticleTile.H:733
void setNumNeighbors(int num_neighbors)
Definition AMReX_ParticleTile.H:953
Long capacity() const
Definition AMReX_ParticleTile.H:1163
int numTotalParticles() const
Returns the total number of particles, real and neighbor.
Definition AMReX_ParticleTile.H:944
std::size_t size() const
Returns the total number of particles (real and neighbor)
Definition AMReX_ParticleTile.H:892
static constexpr bool has_polymorphic_allocator
Definition AMReX_ParticleTile.H:754
ParticleTileDataType getParticleTileData()
Definition AMReX_ParticleTile.H:1205
void reserve(std::size_t capacity, GrowthStrategy strategy=GrowthStrategy::Poisson)
Definition AMReX_ParticleTile.H:979
void push_back(const SuperParticleType &sp)
Definition AMReX_ParticleTile.H:998
int numNeighborParticles() const
Returns the number of neighbor particles (excluding reals)
Definition AMReX_ParticleTile.H:931
const AoS & GetArrayOfStructs() const
Definition AMReX_ParticleTile.H:881
static constexpr int NAR
Definition AMReX_ParticleTile.H:728
ConstParticleTileDataType getConstParticleTileData() const
Definition AMReX_ParticleTile.H:1281
void shrink_to_fit()
Definition AMReX_ParticleTile.H:1143
T_ParticleType ParticleType
Definition AMReX_ParticleTile.H:727
int numParticles() const
Returns the number of real particles (excluding neighbors)
Definition AMReX_ParticleTile.H:905
void push_back_int(int comp, amrex::Vector< int > const &vec)
Definition AMReX_ParticleTile.H:1122
void resize(std::size_t count, GrowthStrategy strategy=GrowthStrategy::Poisson)
Definition AMReX_ParticleTile.H:971
void swap(ParticleTile< ParticleType, NArrayReal, NArrayInt, Allocator > &other) noexcept
Definition AMReX_ParticleTile.H:1185
void push_back_int(int comp, amrex::Vector< int >::const_iterator beg, amrex::Vector< int >::const_iterator end)
Definition AMReX_ParticleTile.H:1114
void push_back_real(const std::array< ParticleReal, NArrayReal > &v)
Definition AMReX_ParticleTile.H:1043
int NumRuntimeRealComps() const noexcept
Definition AMReX_ParticleTile.H:1139
void collectVectors(Vector< ParticleVector * > &pv, Vector< typename SoA::IdCPU * > &idcpuv, Vector< RealVector * > &rv, Vector< IntVector * > &iv)
Definition AMReX_ParticleTile.H:1357
AoS & GetArrayOfStructs()
Definition AMReX_ParticleTile.H:880
RealType & pos(int index, int position_index) &
Definition AMReX_ParticleTile.H:857
typename SoA::IntVector IntVector
Definition AMReX_ParticleTile.H:748
void push_back_int(const std::array< int, NArrayInt > &v)
Definition AMReX_ParticleTile.H:1095
void push_back_real(int comp, amrex::Vector< amrex::ParticleReal >::const_iterator beg, amrex::Vector< amrex::ParticleReal >::const_iterator end)
Definition AMReX_ParticleTile.H:1062
Allocator< T > AllocatorType
Definition AMReX_ParticleTile.H:725
int NumRuntimeIntComps() const noexcept
Definition AMReX_ParticleTile.H:1141
bool empty() const
Definition AMReX_ParticleTile.H:886
void push_back_int(int comp, int v)
Definition AMReX_ParticleTile.H:1087
RealType pos(int index, int position_index) const &
Definition AMReX_ParticleTile.H:871
decltype(auto) cpu(int index) &
Definition AMReX_ParticleTile.H:839
void define(int a_num_runtime_real, int a_num_runtime_int, std::vector< std::string > *soa_rdata_names=nullptr, std::vector< std::string > *soa_idata_names=nullptr, Arena *a_arena=nullptr)
Definition AMReX_ParticleTile.H:769
SoA & GetStructOfArrays()
Definition AMReX_ParticleTile.H:883
void push_back_int(int comp, std::size_t npar, int v)
Definition AMReX_ParticleTile.H:1130
void push_back_real(int comp, std::size_t npar, ParticleReal v)
Definition AMReX_ParticleTile.H:1078
void push_back_int(int comp, const int *beg, const int *end)
Definition AMReX_ParticleTile.H:1105
typename SoA::RealVector RealVector
Definition AMReX_ParticleTile.H:747
int numRealParticles() const
Returns the number of real particles (excluding neighbors)
Definition AMReX_ParticleTile.H:918
std::conditional_t< ParticleType::is_soa_particle, ThisParticleTileHasNoAoS, ArrayOfStructs< ParticleType, Allocator > > AoS
Definition AMReX_ParticleTile.H:740
static constexpr int NStructReal
Definition AMReX_ParticleTile.H:732
void push_back_real(int comp, ParticleReal v)
Definition AMReX_ParticleTile.H:1035
static void reserve(std::map< ParticleTile< T_ParticleType, NArrayReal, NArrayInt, Allocator > *, int > const &addsizes)
Definition AMReX_ParticleTile.H:1369
The struct used to store particles.
Definition AMReX_Particle.H:405
__host__ __device__ RealVect pos() const &
Definition AMReX_Particle.H:456
__host__ __device__ int & idata(int index) &
Definition AMReX_Particle.H:545
__host__ __device__ ParticleCPUWrapper cpu() &
Definition AMReX_Particle.H:424
__host__ __device__ ParticleIDWrapper id() &
Definition AMReX_Particle.H:427
__host__ __device__ RealType & rdata(int index) &
Definition AMReX_Particle.H:474
Definition AMReX_Particle.H:388
Definition AMReX_ParticleTile.H:390
static constexpr int NArrayReal
Definition AMReX_ParticleTile.H:391
ParticleTileData< SoAParticleBase, NArrayReal, NArrayInt > PTD
Definition AMReX_ParticleTile.H:394
__host__ __device__ uint64_t & idcpu() &
Definition AMReX_ParticleTile.H:420
static Long UnprotectedNextID()
This version can only be used inside omp critical.
Definition AMReX_ParticleTile.H:498
__host__ __device__ ConstParticleCPUWrapper cpu() const &
Definition AMReX_ParticleTile.H:423
static Long the_next_id
Definition AMReX_ParticleTile.H:409
static constexpr int NArrayInt
Definition AMReX_ParticleTile.H:392
__host__ __device__ const uint64_t & idcpu() const &
Definition AMReX_ParticleTile.H:429
__host__ __device__ RealVect pos() const &
Definition AMReX_ParticleTile.H:434
ParticleReal RealType
Definition AMReX_ParticleTile.H:400
__host__ __device__ ParticleCPUWrapper cpu() &
Definition AMReX_ParticleTile.H:414
__host__ __device__ ParticleIDWrapper id() &
Definition AMReX_ParticleTile.H:417
static constexpr bool is_constsoa_particle
Definition AMReX_ParticleTile.H:397
__host__ __device__ RealType & pos(int position_index) &
Definition AMReX_ParticleTile.H:437
static constexpr bool is_rtsoa_particle
Definition AMReX_ParticleTile.H:396
int IntType
Definition AMReX_ParticleTile.H:401
__host__ __device__ SoAParticle(PTD const &ptd, long i)
Definition AMReX_ParticleTile.H:404
__host__ __device__ ConstParticleIDWrapper id() const &
Definition AMReX_ParticleTile.H:426
static Long NextID()
Definition AMReX_ParticleTile.H:477
__host__ __device__ RealType pos(int position_index) const &
Definition AMReX_ParticleTile.H:444
Definition AMReX_StructOfArrays.H:20
Definition AMReX_ParticleTile.H:716
Definition AMReX_ParticleTile.H:714
Definition AMReX_MakeParticle.H:13