1#ifndef AMREX_FFT_R2C_H_
2#define AMREX_FFT_R2C_H_
3#include <AMReX_Config.H>
14template <
typename T>
class OpenBCSolver;
15template <
typename T>
class Poisson;
16template <
typename T>
class PoissonHybrid;
38template <
typename T = Real, FFT::Direction D = FFT::Direction::both,
bool C = false>
43 using MF = std::conditional_t
44 <
C,
cMF, std::conditional_t<std::is_same_v<T,Real>,
48 template <
typename U>
friend class Poisson;
68 explicit R2C (std::array<int,AMREX_SPACEDIM>
const& domain_size,
102 std::array<int,AMREX_SPACEDIM>
const& local_size);
115 std::pair<std::array<int,AMREX_SPACEDIM>,std::array<int,AMREX_SPACEDIM>>
147 std::array<int,AMREX_SPACEDIM>
const& local_size);
166 std::pair<std::array<int,AMREX_SPACEDIM>,std::array<int,AMREX_SPACEDIM>>
189 std::enable_if_t<DIR == Direction::both, int> = 0>
191 int incomp = 0,
int outcomp = 0)
223 void forward (
MF const& inmf,
cMF& outmf,
int incomp = 0,
int outcomp = 0);
238 template <
typename RT,
typename CT,
Direction DIR=D,
bool CP=
C,
241 && ((
sizeof(RT)*2 ==
sizeof(CT) && !CP) ||
242 (
sizeof(RT) ==
sizeof(CT) && CP)),
int> = 0>
253 template <Direction DIR=D, std::enable_if_t<DIR == Direction::both,
int> = 0>
267 void backward (
cMF const& inmf,
MF& outmf,
int incomp = 0,
int outcomp = 0);
282 template <
typename CT,
typename RT,
Direction DIR=D,
bool CP=
C,
285 && ((
sizeof(RT)*2 ==
sizeof(CT) && !CP) ||
286 (
sizeof(RT) ==
sizeof(CT) && CP)),
int> = 0>
317 template <
typename F>
320 template <
typename F>
334 int incomp = 0,
int outcomp = 0);
383 static std::pair<BoxArray,DistributionMapping>
385 std::array<int,AMREX_SPACEDIM>
const& local_size);
387 template <
typename FA,
typename RT>
388 std::pair<std::unique_ptr<char,DataDeleter>,std::size_t>
444template <
typename T, Direction D,
bool C>
446 : m_real_domain(domain),
447 m_spectral_domain_x(make_domain_x(domain)),
448#
if (AMREX_SPACEDIM >= 2)
449 m_spectral_domain_y(make_domain_y(domain)),
450#
if (AMREX_SPACEDIM == 3)
451 m_spectral_domain_z(make_domain_z(domain)),
454 m_sub_helper(domain),
459 static_assert(std::is_same_v<float,T> || std::is_same_v<double,T>);
462#if (AMREX_SPACEDIM == 2)
467 int(domain.
length(1) > 1) +
468 int(domain.
length(2) > 1)) >= 2);
483#if (AMREX_SPACEDIM == 3)
514 m_rx.define(bax, dmx, ncomp, 0,
MFInfo().SetAlloc(
false));
518 for (
auto &
b : bl) {
534#if (AMREX_SPACEDIM >= 2)
535#if (AMREX_SPACEDIM == 2)
536 bool batch_on_y =
false;
545 if (cbay.size() == dmx.size()) {
554#if (AMREX_SPACEDIM == 3)
559 {
false,
true,
true},
true);
561 if (cbaz.size() == dmx.size()) {
563 }
else if (cbaz.size() == cdmy.
size()) {
600#if (AMREX_SPACEDIM >= 2)
603 m_cmd_x2y = std::make_unique<MultiBlockCommMetaData>
605 m_cmd_y2x = std::make_unique<MultiBlockCommMetaData>
609#if (AMREX_SPACEDIM == 3)
613 m_cmd_x2z = std::make_unique<MultiBlockCommMetaData>
615 m_cmd_z2x = std::make_unique<MultiBlockCommMetaData>
619 m_cmd_y2z = std::make_unique<MultiBlockCommMetaData>
621 m_cmd_z2y = std::make_unique<MultiBlockCommMetaData>
631 if (myproc <
m_rx.size())
637 Box const& box =
m_rx.box(myproc);
638 auto* pr =
m_rx[myproc].dataPtr();
654#if (AMREX_SPACEDIM >= 2)
659#if (AMREX_SPACEDIM == 3)
675 auto* pr = (
void*)
m_rx[0].dataPtr();
676 auto* pc = (
void*)
m_cx[0].dataPtr();
678 m_fft_fwd_x.template init_r2c<Direction::forward>(len, pr, pc,
false, ncomp);
682 m_fft_fwd_x.template init_r2c<Direction::forward>(len, pr, pc,
false, ncomp);
685 m_fft_bwd_x.template init_r2c<Direction::backward>(len, pr, pc,
false, ncomp);
692template <
typename T, Direction D,
bool C>
697template <
typename T, Direction D,
bool C>
700 if (m_fft_bwd_x.plan != m_fft_fwd_x.plan) {
701 m_fft_bwd_x.destroy();
703 if (m_fft_bwd_y.plan != m_fft_fwd_y.plan) {
704 m_fft_bwd_y.destroy();
706 if (m_fft_bwd_z.plan != m_fft_fwd_z.plan) {
707 m_fft_bwd_z.destroy();
709 m_fft_fwd_x.destroy();
710 m_fft_fwd_y.destroy();
711 m_fft_fwd_z.destroy();
712 if (m_fft_bwd_x_half.plan != m_fft_fwd_x_half.plan) {
713 m_fft_bwd_x_half.destroy();
715 m_fft_fwd_x_half.destroy();
718template <
typename T, Direction D,
bool C>
719std::pair<BoxArray,DistributionMapping>
721 std::array<int,AMREX_SPACEDIM>
const& local_size)
725 Box bx(lo, lo+len-1);
732 pmap.reserve(allboxes.
size());
733 for (
int i = 0; i < allboxes.
size(); ++i) {
734 if (allboxes[i].ok()) {
738 allboxes.erase(std::remove_if(allboxes.begin(), allboxes.end(),
739 [=] (
Box const&
b) { return b.isEmpty(); }),
741 BoxList bl(std::move(allboxes));
748template <
typename T, Direction D,
bool C>
750 std::array<int,AMREX_SPACEDIM>
const& local_size)
752 auto const& [ba, dm] = make_layout_from_local_domain(local_start, local_size);
753 m_raw_mf =
MF(ba, dm, m_rx.nComp(), 0,
MFInfo().SetAlloc(
false));
756template <
typename T, Direction D,
bool C>
757std::pair<std::array<int,AMREX_SPACEDIM>,std::array<int,AMREX_SPACEDIM>>
760 m_raw_mf =
MF(m_rx.boxArray(), m_rx.DistributionMap(), m_rx.nComp(), 0,
764 if (myproc < m_rx.size()) {
765 Box const& box = m_rx.box(myproc);
766 return std::make_pair(box.
smallEnd().toArray(),
769 return std::make_pair(std::array<int,AMREX_SPACEDIM>{
AMREX_D_DECL(0,0,0)},
774template <
typename T, Direction D,
bool C>
776 std::array<int,AMREX_SPACEDIM>
const& local_size)
778 auto const& [ba, dm] = make_layout_from_local_domain(local_start, local_size);
779 m_raw_cmf =
cMF(ba, dm, m_rx.nComp(), 0,
MFInfo().SetAlloc(
false));
782template <
typename T, Direction D,
bool C>
783std::pair<std::array<int,AMREX_SPACEDIM>,std::array<int,AMREX_SPACEDIM>>
786 auto const ncomp = m_info.batch_size;
787 auto const& [ba, dm] = getSpectralDataLayout();
792 if (myproc < m_raw_cmf.size()) {
793 Box const& box = m_raw_cmf.box(myproc);
794 return std::make_pair(box.
smallEnd().toArray(), box.
length().toArray());
796 return std::make_pair(std::array<int,AMREX_SPACEDIM>{
AMREX_D_DECL(0,0,0)},
801template <
typename T, Direction D,
bool C>
804 if (
C || m_r2c_sub) {
amrex::Abort(
"R2C: OpenBC not supported with reduced dimensions or complex inputs"); }
806#if (AMREX_SPACEDIM == 3)
807 if (m_do_alld_fft) {
return; }
809 auto const ncomp = m_info.batch_size;
811 if (m_slab_decomp && ! m_fft_fwd_x_half.defined) {
814 Box bottom_half = m_real_domain;
815 bottom_half.
growHi(2,-m_real_domain.length(2)/2);
816 Box box = fab->box() & bottom_half;
818 auto* pr = fab->dataPtr();
822 m_fft_fwd_x_half.template init_r2c<Direction::forward>
823 (box, pr, pc, m_slab_decomp, ncomp);
824 m_fft_bwd_x_half = m_fft_fwd_x_half;
827 m_fft_fwd_x_half.template init_r2c<Direction::forward>
828 (box, pr, pc, m_slab_decomp, ncomp);
831 m_fft_bwd_x_half.template init_r2c<Direction::backward>
832 (box, pr, pc, m_slab_decomp, ncomp);
839 if (m_cmd_x2z && ! m_cmd_x2z_half) {
840 Box bottom_half = m_spectral_domain_z;
843 bottom_half.
growHi(0,-m_spectral_domain_z.length(0)/2);
844 m_cmd_x2z_half = std::make_unique<MultiBlockCommMetaData>
845 (m_cz, bottom_half, m_cx,
IntVect(0), m_dtos_x2z);
848 if (m_cmd_z2x && ! m_cmd_z2x_half) {
849 Box bottom_half = m_spectral_domain_x;
850 bottom_half.
growHi(2,-m_spectral_domain_x.length(2)/2);
851 m_cmd_z2x_half = std::make_unique<MultiBlockCommMetaData>
852 (m_cx, bottom_half, m_cz,
IntVect(0), m_dtos_z2x);
857template <
typename T, Direction D,
bool C>
864 auto const ncomp = m_info.batch_size;
867 if (m_sub_helper.ghost_safe(inmf.nGrowVect())) {
868 m_r2c_sub->forward(m_sub_helper.make_alias_mf(inmf), incomp);
870 MF tmp(inmf.boxArray(), inmf.DistributionMap(), ncomp, 0);
871 tmp.LocalCopy(inmf, incomp, 0, ncomp,
IntVect(0));
872 m_r2c_sub->forward(m_sub_helper.make_alias_mf(tmp),0);
877 if (&m_rx != &inmf) {
878 m_rx.ParallelCopy(inmf, incomp, 0, ncomp);
883 m_fft_fwd_x.template compute_c2c<Direction::forward>();
885 m_fft_fwd_x.template compute_r2c<Direction::forward>();
890 auto& fft_x = m_openbc_half ? m_fft_fwd_x_half : m_fft_fwd_x;
892 fft_x.template compute_c2c<Direction::forward>();
894 fft_x.template compute_r2c<Direction::forward>();
898 ParallelCopy(m_cy, m_cx, *m_cmd_x2y, 0, 0, ncomp, m_dtos_x2y);
900 m_fft_fwd_y.template compute_c2c<Direction::forward>();
903 ParallelCopy(m_cz, m_cy, *m_cmd_y2z, 0, 0, ncomp, m_dtos_y2z);
905#if (AMREX_SPACEDIM == 3)
906 else if ( m_cmd_x2z) {
911 {components, m_dtos_x2z};
912 auto handler = ParallelCopy_nowait(m_cz, m_cx, *m_cmd_x2z_half, packing);
914 Box upper_half = m_spectral_domain_z;
917 upper_half.
growLo (0,-m_spectral_domain_z.length(0)/2);
918 m_cz.setVal(0, upper_half, 0, ncomp);
920 ParallelCopy_finish(m_cz, std::move(handler), *m_cmd_x2z_half, packing);
922 ParallelCopy(m_cz, m_cx, *m_cmd_x2z, 0, 0, ncomp, m_dtos_x2z);
926 m_fft_fwd_z.template compute_c2c<Direction::forward>();
929template <
typename T, Direction D,
bool C>
930template <
typename FA,
typename RT>
931std::pair<std::unique_ptr<char,DataDeleter>,std::size_t>
936 using FAB =
typename FA::FABType::value_type;
937 using T_FAB =
typename FAB::value_type;
938 static_assert(
sizeof(T_FAB) ==
sizeof(RT));
940 auto const ncomp = m_info.batch_size;
941 auto const& ia = fa.IndexArray();
946 if ( ! ia.empty() ) {
948 Box const& box = fa.fabbox(K);
952 sz =
sizeof(T_FAB) * box.
numPts() * ncomp;
955 fa.setFab(K, FAB(box,ncomp,
pp));
959 return std::make_pair(std::unique_ptr<char,DataDeleter>{},std::size_t(0));
961 return std::make_pair(std::unique_ptr<char,DataDeleter>
967template <
typename T, Direction D,
bool C>
968template <
typename RT,
typename CT,
Direction DIR,
bool CP,
971 && ((
sizeof(RT)*2 ==
sizeof(CT) && !CP) ||
972 (
sizeof(RT) ==
sizeof(CT) && CP)),
int> >
975 auto [rdata, rsz] = install_raw_ptr(m_raw_mf, in);
976 auto [cdata, csz] = install_raw_ptr(m_raw_cmf, out);
983 std::memcpy(rdata.get(),in,rsz);
994 std::memcpy(out,cdata.get(),csz);
999template <
typename T, Direction D,
bool C>
1000template <Direction DIR, std::enable_if_t<DIR == Direction::both,
int> >
1006template <
typename T, Direction D,
bool C>
1012 auto const ncomp = m_info.batch_size;
1015 if (m_sub_helper.ghost_safe(outmf.nGrowVect())) {
1016 MF submf = m_sub_helper.make_alias_mf(outmf);
1017 IntVect const& subngout = m_sub_helper.make_iv(ngout);
1018 Periodicity const& subperiod = m_sub_helper.make_periodicity(period);
1019 m_r2c_sub->backward_doit(submf, subngout, subperiod, outcomp);
1021 MF tmp(outmf.boxArray(), outmf.DistributionMap(), ncomp,
1022 m_sub_helper.make_safe_ghost(outmf.nGrowVect()));
1023 this->backward_doit(tmp, ngout, period, 0);
1024 outmf.LocalCopy(tmp, 0, outcomp, ncomp, tmp.nGrowVect());
1029 if (m_do_alld_fft) {
1031 m_fft_bwd_x.template compute_c2c<Direction::backward>();
1033 m_fft_bwd_x.template compute_r2c<Direction::backward>();
1035 outmf.ParallelCopy(m_rx, 0, outcomp, ncomp,
IntVect(0),
1040 m_fft_bwd_z.template compute_c2c<Direction::backward>();
1042 ParallelCopy(m_cy, m_cz, *m_cmd_z2y, 0, 0, ncomp, m_dtos_z2y);
1044#if (AMREX_SPACEDIM == 3)
1045 else if ( m_cmd_z2x) {
1046 auto const& cmd = m_openbc_half ? m_cmd_z2x_half : m_cmd_z2x;
1047 ParallelCopy(m_cx, m_cz, *cmd, 0, 0, ncomp, m_dtos_z2x);
1051 m_fft_bwd_y.template compute_c2c<Direction::backward>();
1053 ParallelCopy(m_cx, m_cy, *m_cmd_y2x, 0, 0, ncomp, m_dtos_y2x);
1056 auto& fft_x = m_openbc_half ? m_fft_bwd_x_half : m_fft_bwd_x;
1058 fft_x.template compute_c2c<Direction::backward>();
1060 fft_x.template compute_r2c<Direction::backward>();
1062 outmf.ParallelCopy(m_rx, 0, outcomp, ncomp,
IntVect(0),
1066template <
typename T, Direction D,
bool C>
1067template <
typename CT,
typename RT,
Direction DIR,
bool CP,
1070 && ((
sizeof(RT)*2 ==
sizeof(CT) && !CP) ||
1071 (
sizeof(RT) ==
sizeof(CT) && CP)),
int> >
1074 auto [rdata, rsz] = install_raw_ptr(m_raw_mf, out);
1075 auto [cdata, csz] = install_raw_ptr(m_raw_cmf, in);
1082 std::memcpy(cdata.get(),in,csz);
1093 std::memcpy(out,rdata.get(),rsz);
1098template <
typename T, Direction D,
bool C>
1106 if (!fab) {
return {fwd, bwd};}
1108 Box const& box = fab->box();
1111 auto const ncomp = m_info.batch_size;
1113#ifdef AMREX_USE_SYCL
1114 fwd.template init_c2c<Direction::forward>(box, pio, ncomp, ndims);
1118 fwd.template init_c2c<Direction::forward>(box, pio, ncomp, ndims);
1121 bwd.template init_c2c<Direction::backward>(box, pio, ncomp, ndims);
1128template <
typename T, Direction D,
bool C>
1129template <
typename F>
1132 if (m_info.twod_mode || m_info.batch_size > 1) {
1134#if (AMREX_SPACEDIM > 1)
1135 }
else if (m_r2c_sub) {
1137#if (AMREX_SPACEDIM == 2)
1139 m_r2c_sub->post_forward_doit_1
1142 post_forward(0, i, 0, sp);
1145 if (m_real_domain.length(0) == 1 && m_real_domain.length(1) == 1) {
1147 m_r2c_sub->post_forward_doit_1
1150 post_forward(0, 0, i, sp);
1152 }
else if (m_real_domain.length(0) == 1 && m_real_domain.length(2) == 1) {
1154 m_r2c_sub->post_forward_doit_1
1157 post_forward(0, i, 0, sp);
1159 }
else if (m_real_domain.length(0) == 1) {
1161 m_r2c_sub->post_forward_doit_1
1164 post_forward(0, i, j, sp);
1166 }
else if (m_real_domain.length(1) == 1) {
1168 m_r2c_sub->post_forward_doit_1
1171 post_forward(i, 0, j, sp);
1174 amrex::Abort(
"R2c::post_forward_doit_0: how did this happen?");
1179 this->post_forward_doit_1(post_forward);
1183template <
typename T, Direction D,
bool C>
1184template <
typename F>
1187 if (m_info.twod_mode || m_info.batch_size > 1) {
1189 }
else if (m_r2c_sub) {
1190 amrex::Abort(
"R2C::post_forward_doit_1: How did this happen?");
1192 if ( ! m_cz.empty()) {
1195 auto const& a = spectral_fab->array();
1199 post_forward(jx,ky,iz,a(iz,jx,ky));
1202 }
else if ( ! m_cy.empty()) {
1205 auto const& a = spectral_fab->array();
1209 post_forward(jx,iy,k,a(iy,jx,k));
1215 auto const& a = spectral_fab->array();
1219 post_forward(i,j,k,a(i,j,k));
1226template <
typename T, Direction D,
bool C>
1229#if (AMREX_SPACEDIM == 3)
1230 if (m_info.twod_mode) {
1231 if (m_real_domain.length(2) > 1) {
1232 return T(1)/T(Long(m_real_domain.length(0)) *
1233 Long(m_real_domain.length(1)));
1235 return T(1)/T(m_real_domain.length(0));
1240 return T(1)/T(m_real_domain.numPts());
1244template <
typename T, Direction D,
bool C>
1247std::pair<typename R2C<T,D,C>::cMF *,
IntVect>
1250#if (AMREX_SPACEDIM > 1)
1252 auto [cmf, order] = m_r2c_sub->getSpectralData();
1253 return std::make_pair(cmf, m_sub_helper.inverse_order(order));
1256 if (!m_cz.empty()) {
1258 }
else if (!m_cy.empty()) {
1265template <
typename T, Direction D,
bool C>
1272 auto const ncomp = m_info.batch_size;
1276 bool inmf_safe = m_sub_helper.ghost_safe(inmf.nGrowVect());
1277 MF inmf_sub, inmf_tmp;
1280 inmf_sub = m_sub_helper.make_alias_mf(inmf);
1281 incomp_sub = incomp;
1283 inmf_tmp.define(inmf.boxArray(), inmf.DistributionMap(), ncomp, 0);
1284 inmf_tmp.LocalCopy(inmf, incomp, 0, ncomp,
IntVect(0));
1285 inmf_sub = m_sub_helper.make_alias_mf(inmf_tmp);
1289 bool outmf_safe = m_sub_helper.ghost_safe(outmf.
nGrowVect());
1290 cMF outmf_sub, outmf_tmp;
1293 outmf_sub = m_sub_helper.make_alias_mf(outmf);
1294 outcomp_sub = outcomp;
1297 outmf_sub = m_sub_helper.make_alias_mf(outmf_tmp);
1301 m_r2c_sub->forward(inmf_sub, outmf_sub, incomp_sub, outcomp_sub);
1310 if (!m_cz.empty()) {
1313 (outmf, m_spectral_domain_x, m_cz,
IntVect(0), dtos);
1314 ParallelCopy(outmf, m_cz, cmd, 0, outcomp, ncomp, dtos);
1315 }
else if (!m_cy.empty()) {
1317 (outmf, m_spectral_domain_x, m_cy,
IntVect(0), m_dtos_y2x);
1318 ParallelCopy(outmf, m_cy, cmd, 0, outcomp, ncomp, m_dtos_y2x);
1325template <
typename T, Direction D,
bool C>
1333template <
typename T, Direction D,
bool C>
1335 Periodicity const& period,
int incomp,
int outcomp)
1339 auto const ncomp = m_info.batch_size;
1343 bool inmf_safe = m_sub_helper.ghost_safe(inmf.
nGrowVect());
1344 cMF inmf_sub, inmf_tmp;
1347 inmf_sub = m_sub_helper.make_alias_mf(inmf);
1348 incomp_sub = incomp;
1352 inmf_sub = m_sub_helper.make_alias_mf(inmf_tmp);
1356 bool outmf_safe = m_sub_helper.ghost_safe(outmf.nGrowVect());
1357 MF outmf_sub, outmf_tmp;
1360 outmf_sub = m_sub_helper.make_alias_mf(outmf);
1361 outcomp_sub = outcomp;
1363 IntVect const& ngtmp = m_sub_helper.make_safe_ghost(outmf.nGrowVect());
1364 outmf_tmp.define(outmf.boxArray(), outmf.DistributionMap(), ncomp, ngtmp);
1365 outmf_sub = m_sub_helper.make_alias_mf(outmf_tmp);
1369 IntVect const& subngout = m_sub_helper.make_iv(ngout);
1370 Periodicity const& subperiod = m_sub_helper.make_periodicity(period);
1371 m_r2c_sub->backward_doit(inmf_sub, outmf_sub, subngout, subperiod, incomp_sub, outcomp_sub);
1374 outmf.LocalCopy(outmf_tmp, 0, outcomp, ncomp, outmf_tmp.nGrowVect());
1379 if (!m_cz.empty()) {
1382 (m_cz, m_spectral_domain_z, inmf,
IntVect(0), dtos);
1384 }
else if (!m_cy.empty()) {
1386 (m_cy, m_spectral_domain_y, inmf,
IntVect(0), m_dtos_x2y);
1387 ParallelCopy(m_cy, inmf, cmd, incomp, 0, ncomp, m_dtos_x2y);
1389 m_cx.ParallelCopy(inmf, incomp, 0, ncomp);
1391 backward_doit(outmf, ngout, period, outcomp);
1395template <
typename T, Direction D,
bool C>
1396std::pair<BoxArray,DistributionMapping>
1399#if (AMREX_SPACEDIM > 1)
1401 auto const& [ba, dm] = m_r2c_sub->getSpectralDataLayout();
1402 return std::make_pair(m_sub_helper.inverse_boxarray(ba), dm);
1406#if (AMREX_SPACEDIM == 3)
1407 if (!m_cz.empty()) {
1408 BoxList bl = m_cz.boxArray().boxList();
1409 for (
auto&
b : bl) {
1410 auto lo =
b.smallEnd();
1411 auto hi =
b.bigEnd();
1412 std::swap(lo[0], lo[1]);
1413 std::swap(lo[1], lo[2]);
1414 std::swap(hi[0], hi[1]);
1415 std::swap(hi[1], hi[2]);
1419 return std::make_pair(
BoxArray(std::move(bl)), m_cz.DistributionMap());
1422#if (AMREX_SPACEDIM >= 2)
1423 if (!m_cy.empty()) {
1424 BoxList bl = m_cy.boxArray().boxList();
1425 for (
auto&
b : bl) {
1426 auto lo =
b.smallEnd();
1427 auto hi =
b.bigEnd();
1428 std::swap(lo[0], lo[1]);
1429 std::swap(hi[0], hi[1]);
1433 return std::make_pair(
BoxArray(std::move(bl)), m_cy.DistributionMap());
1437 return std::make_pair(m_cx.boxArray(), m_cx.DistributionMap());
1442template <
typename T = Real, FFT::Direction D = FFT::Direction::both>
#define BL_PROFILE(a)
Definition AMReX_BLProfiler.H:551
#define AMREX_ALWAYS_ASSERT(EX)
Definition AMReX_BLassert.H:50
#define AMREX_GPU_DEVICE
Definition AMReX_GpuQualifiers.H:18
amrex::ParmParse pp
Input file parser instance for the given namespace.
Definition AMReX_HypreIJIface.cpp:15
if(!(yy_init))
Definition amrex_iparser.lex.nolint.H:935
virtual void * alloc(std::size_t sz)=0
A collection of Boxes stored in an Array.
Definition AMReX_BoxArray.H:550
A class for managing a List of Boxes that share a common IndexType. This class implements operations ...
Definition AMReX_BoxList.H:52
BoxList & shift(int dir, int nzones)
Applies Box::shift(int,int) to each Box in the BoxList.
AMREX_GPU_HOST_DEVICE int shortside(int &dir) const noexcept
Returns length of shortest side. dir is modified to give direction with shortest side: 0....
Definition AMReX_Box.H:427
AMREX_GPU_HOST_DEVICE IndexTypeND< dim > ixType() const noexcept
Returns the indexing type.
Definition AMReX_Box.H:127
AMREX_GPU_HOST_DEVICE IntVectND< dim > size() const noexcept
Return the length of the BoxND.
Definition AMReX_Box.H:139
AMREX_GPU_HOST_DEVICE IntVectND< dim > length() const noexcept
Return the length of the BoxND.
Definition AMReX_Box.H:146
AMREX_GPU_HOST_DEVICE BoxND & growLo(int idir, int n_cell=1) noexcept
Grow the BoxND on the low end by n_cell cells in direction idir. NOTE: n_cell negative shrinks the Bo...
Definition AMReX_Box.H:648
AMREX_GPU_HOST_DEVICE BoxND & growHi(int idir, int n_cell=1) noexcept
Grow the BoxND on the high end by n_cell cells in direction idir. NOTE: n_cell negative shrinks the B...
Definition AMReX_Box.H:659
AMREX_GPU_HOST_DEVICE const IntVectND< dim > & smallEnd() const &noexcept
Get the smallend of the BoxND.
Definition AMReX_Box.H:105
AMREX_GPU_HOST_DEVICE bool ok() const noexcept
Checks if it is a proper BoxND (including a valid type).
Definition AMReX_Box.H:200
AMREX_GPU_HOST_DEVICE Long numPts() const noexcept
Returns the number of points contained in the BoxND.
Definition AMReX_Box.H:346
AMREX_GPU_HOST_DEVICE const IntVectND< dim > & bigEnd() const &noexcept
Get the bigend.
Definition AMReX_Box.H:116
Calculates the distribution of FABs to MPI processes.
Definition AMReX_DistributionMapping.H:41
Long size() const noexcept
Length of the underlying processor map.
Definition AMReX_DistributionMapping.H:127
Definition AMReX_FFT_OpenBCSolver.H:11
3D Poisson solver for periodic, Dirichlet & Neumann boundaries in the first two dimensions,...
Definition AMReX_FFT_Poisson.H:106
Poisson solver for periodic, Dirichlet & Neumann boundaries using FFT.
Definition AMReX_FFT_Poisson.H:22
Parallel Discrete Fourier Transform.
Definition AMReX_FFT_R2C.H:40
std::unique_ptr< MultiBlockCommMetaData > m_cmd_x2z_half
Definition AMReX_FFT_R2C.H:409
Info m_info
Definition AMReX_FFT_R2C.H:437
std::conditional_t< C, cMF, std::conditional_t< std::is_same_v< T, Real >, MultiFab, FabArray< BaseFab< T > > > > MF
Definition AMReX_FFT_R2C.H:45
R2C & operator=(R2C const &)=delete
void backward_doit(cMF const &inmf, MF &outmf, IntVect const &ngout=IntVect(0), Periodicity const &period=Periodicity::NonPeriodic(), int incomp=0, int outcomp=0)
Definition AMReX_FFT_R2C.H:1334
void backward_doit(MF &outmf, IntVect const &ngout=IntVect(0), Periodicity const &period=Periodicity::NonPeriodic(), int outcomp=0)
Definition AMReX_FFT_R2C.H:1007
Box m_spectral_domain_y
Definition AMReX_FFT_R2C.H:431
cMF m_cy
Definition AMReX_FFT_R2C.H:420
Plan< T > m_fft_fwd_y
Definition AMReX_FFT_R2C.H:393
MF m_raw_mf
Definition AMReX_FFT_R2C.H:423
Plan< T > m_fft_fwd_z
Definition AMReX_FFT_R2C.H:395
std::pair< std::array< int, AMREX_SPACEDIM >, std::array< int, AMREX_SPACEDIM > > getLocalSpectralDomain() const
Get local spectral domain.
Definition AMReX_FFT_R2C.H:784
void forward(MF const &inmf, cMF &outmf, int incomp=0, int outcomp=0)
Forward transform.
Definition AMReX_FFT_R2C.H:1268
std::pair< std::array< int, AMREX_SPACEDIM >, std::array< int, AMREX_SPACEDIM > > getLocalDomain() const
Get local domain.
Definition AMReX_FFT_R2C.H:758
~R2C()
Definition AMReX_FFT_R2C.H:698
std::unique_ptr< MultiBlockCommMetaData > m_cmd_z2x_half
Definition AMReX_FFT_R2C.H:410
std::unique_ptr< MultiBlockCommMetaData > m_cmd_x2y
Definition AMReX_FFT_R2C.H:403
static Box make_domain_x(Box const &domain)
Definition AMReX_FFT_R2C.H:338
Box m_spectral_domain_x
Definition AMReX_FFT_R2C.H:430
R2C(Box const &domain, Info const &info=Info{})
Constructor.
Definition AMReX_FFT_R2C.H:445
cMF m_cx
Definition AMReX_FFT_R2C.H:419
Plan< T > m_fft_bwd_x
Definition AMReX_FFT_R2C.H:392
std::unique_ptr< char, DataDeleter > m_data_2
Definition AMReX_FFT_R2C.H:427
static Box make_domain_y(Box const &domain)
Definition AMReX_FFT_R2C.H:353
void backward(cMF const &inmf, MF &outmf, int incomp=0, int outcomp=0)
Backward transform.
Definition AMReX_FFT_R2C.H:1328
Swap02 m_dtos_y2z
Definition AMReX_FFT_R2C.H:413
void backward(MF &outmf, int outcomp=0)
Backward transform.
Definition AMReX_FFT_R2C.H:1001
bool m_do_alld_fft
Definition AMReX_FFT_R2C.H:439
void setLocalSpectralDomain(std::array< int, AMREX_SPACEDIM > const &local_start, std::array< int, AMREX_SPACEDIM > const &local_size)
Set local spectral domain.
Definition AMReX_FFT_R2C.H:775
void post_forward_doit_1(F const &post_forward)
Definition AMReX_FFT_R2C.H:1185
Swap01 m_dtos_x2y
Definition AMReX_FFT_R2C.H:411
std::unique_ptr< MultiBlockCommMetaData > m_cmd_x2z
Definition AMReX_FFT_R2C.H:407
RotateFwd m_dtos_x2z
Definition AMReX_FFT_R2C.H:415
std::unique_ptr< MultiBlockCommMetaData > m_cmd_y2z
Definition AMReX_FFT_R2C.H:405
Plan< T > m_fft_bwd_x_half
Definition AMReX_FFT_R2C.H:398
T scalingFactor() const
Definition AMReX_FFT_R2C.H:1227
Box m_spectral_domain_z
Definition AMReX_FFT_R2C.H:432
cMF m_cz
Definition AMReX_FFT_R2C.H:421
std::unique_ptr< MultiBlockCommMetaData > m_cmd_z2y
Definition AMReX_FFT_R2C.H:406
std::unique_ptr< R2C< T, D, C > > m_r2c_sub
Definition AMReX_FFT_R2C.H:434
void post_forward_doit_0(F const &post_forward)
Definition AMReX_FFT_R2C.H:1130
detail::SubHelper m_sub_helper
Definition AMReX_FFT_R2C.H:435
R2C(std::array< int, AMREX_SPACEDIM > const &domain_size, Info const &info=Info{})
Constructor.
Definition AMReX_FFT_R2C.H:693
Swap01 m_dtos_y2x
Definition AMReX_FFT_R2C.H:412
std::pair< Plan< T >, Plan< T > > make_c2c_plans(cMF &inout, int ndims) const
Definition AMReX_FFT_R2C.H:1100
std::pair< std::unique_ptr< char, DataDeleter >, std::size_t > install_raw_ptr(FA &fa, RT const *p)
Definition AMReX_FFT_R2C.H:932
void forward(RT const *in, CT *out)
Forward transform.
Definition AMReX_FFT_R2C.H:973
Plan< T > m_fft_bwd_z
Definition AMReX_FFT_R2C.H:396
Plan< T > m_fft_fwd_x_half
Definition AMReX_FFT_R2C.H:397
std::unique_ptr< MultiBlockCommMetaData > m_cmd_z2x
Definition AMReX_FFT_R2C.H:408
bool m_openbc_half
Definition AMReX_FFT_R2C.H:441
std::pair< BoxArray, DistributionMapping > getSpectralDataLayout() const
Get BoxArray and DistributionMapping for spectral data.
Definition AMReX_FFT_R2C.H:1397
void prepare_openbc()
Definition AMReX_FFT_R2C.H:802
static Box make_domain_z(Box const &domain)
Definition AMReX_FFT_R2C.H:368
std::pair< cMF *, IntVect > getSpectralData() const
Get the internal spectral data.
FabArray< BaseFab< GpuComplex< T > > > cMF
Definition AMReX_FFT_R2C.H:42
std::unique_ptr< MultiBlockCommMetaData > m_cmd_y2x
Definition AMReX_FFT_R2C.H:404
Box m_real_domain
Definition AMReX_FFT_R2C.H:429
bool m_slab_decomp
Definition AMReX_FFT_R2C.H:440
void forwardThenBackward(MF const &inmf, MF &outmf, F const &post_forward, int incomp=0, int outcomp=0)
Forward and then backward transform.
Definition AMReX_FFT_R2C.H:190
MF m_rx
Definition AMReX_FFT_R2C.H:418
cMF m_raw_cmf
Definition AMReX_FFT_R2C.H:424
static std::pair< BoxArray, DistributionMapping > make_layout_from_local_domain(std::array< int, AMREX_SPACEDIM > const &local_start, std::array< int, AMREX_SPACEDIM > const &local_size)
Definition AMReX_FFT_R2C.H:720
Plan< T > m_fft_bwd_y
Definition AMReX_FFT_R2C.H:394
void backward(CT const *in, RT *out)
Backward transform.
Definition AMReX_FFT_R2C.H:1072
std::unique_ptr< char, DataDeleter > m_data_1
Definition AMReX_FFT_R2C.H:426
Plan< T > m_fft_fwd_x
Definition AMReX_FFT_R2C.H:391
void setLocalDomain(std::array< int, AMREX_SPACEDIM > const &local_start, std::array< int, AMREX_SPACEDIM > const &local_size)
Set local domain.
Definition AMReX_FFT_R2C.H:749
RotateBwd m_dtos_z2x
Definition AMReX_FFT_R2C.H:416
void forward(MF const &inmf, int incomp=0)
Forward transform.
Definition AMReX_FFT_R2C.H:860
Swap02 m_dtos_z2y
Definition AMReX_FFT_R2C.H:414
IntVect nGrowVect() const noexcept
Definition AMReX_FabArrayBase.H:79
int size() const noexcept
Return the number of FABs in the FabArray.
Definition AMReX_FabArrayBase.H:109
const DistributionMapping & DistributionMap() const noexcept
Return constant reference to associated DistributionMapping.
Definition AMReX_FabArrayBase.H:130
bool empty() const noexcept
Definition AMReX_FabArrayBase.H:88
Box fabbox(int K) const noexcept
Return the Kth FABs Box in the FabArray. That is, the region the Kth fab is actually defined on.
const BoxArray & boxArray() const noexcept
Return a constant reference to the BoxArray that defines the valid region associated with this FabArr...
Definition AMReX_FabArrayBase.H:94
void setFab(int boxno, std::unique_ptr< FAB > elem)
Explicitly set the Kth FAB in the FabArray to point to elem.
Definition AMReX_FabArray.H:2126
void ParallelCopy(const FabArray< FAB > &src, const Periodicity &period=Periodicity::NonPeriodic(), CpOp op=FabArrayBase::COPY)
Definition AMReX_FabArray.H:840
typename std::conditional_t< IsBaseFab< BaseFab< GpuComplex< T > > >::value, BaseFab< GpuComplex< T > >, FABType >::value_type value_type
Definition AMReX_FabArray.H:355
void define(const BoxArray &bxs, const DistributionMapping &dm, int nvar, int ngrow, const MFInfo &info=MFInfo(), const FabFactory< FAB > &factory=DefaultFabFactory< FAB >())
Define this FabArray identically to that performed by the constructor having an analogous function si...
Definition AMReX_FabArray.H:1942
void LocalCopy(FabArray< SFAB > const &src, int scomp, int dcomp, int ncomp, IntVect const &nghost)
Perform local copy of FabArray data.
Definition AMReX_FabArray.H:1733
A collection (stored as an array) of FArrayBox objects.
Definition AMReX_MultiFab.H:38
This provides length of period for periodic domains. 0 means it is not periodic in that direction....
Definition AMReX_Periodicity.H:17
static const Periodicity & NonPeriodic() noexcept
Definition AMReX_Periodicity.cpp:52
This class is a thin wrapper around std::vector. Unlike vector, Vector::operator[] provides bound che...
Definition AMReX_Vector.H:27
Long size() const noexcept
Definition AMReX_Vector.H:50
std::unique_ptr< char, DataDeleter > make_mfs_share(FA1 &fa1, FA2 &fa2)
Definition AMReX_FFT_Helper.H:1383
FA::FABType::value_type * get_fab(FA &fa)
Definition AMReX_FFT_Helper.H:1372
DistributionMapping make_iota_distromap(Long n)
Definition AMReX_FFT.cpp:88
Definition AMReX_FFT.cpp:7
Direction
Definition AMReX_FFT_Helper.H:48
void dtod_memcpy_async(void *p_d_dst, const void *p_d_src, const std::size_t sz) noexcept
Definition AMReX_GpuDevice.H:279
void streamSynchronize() noexcept
Definition AMReX_GpuDevice.H:237
int MyProcSub() noexcept
my sub-rank in current frame
Definition AMReX_ParallelContext.H:76
int NProcsSub() noexcept
number of ranks in current frame
Definition AMReX_ParallelContext.H:74
MPI_Comm Communicator() noexcept
Definition AMReX_ParallelDescriptor.H:210
int MyProc() noexcept
return the rank number local to the current Parallel Context
Definition AMReX_ParallelDescriptor.H:125
int NProcs() noexcept
return the number of MPI ranks local to the current Parallel Context
Definition AMReX_ParallelDescriptor.H:243
std::enable_if_t< std::is_integral_v< T > > ParallelFor(TypeList< CTOs... > ctos, std::array< int, sizeof...(CTOs)> const &runtime_options, T N, F &&f)
Definition AMReX_CTOParallelForImpl.H:191
BoxND< AMREX_SPACEDIM > Box
Definition AMReX_BaseFwd.H:27
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE constexpr T elemwiseMin(T const &a, T const &b) noexcept
Definition AMReX_Algorithm.H:49
bool is_aligned(const void *p, std::size_t alignment) noexcept
Definition AMReX_Arena.H:35
IntVectND< AMREX_SPACEDIM > IntVect
Definition AMReX_BaseFwd.H:30
BoxArray decompose(Box const &domain, int nboxes, Array< bool, AMREX_SPACEDIM > const &decomp={AMREX_D_DECL(true, true, true)}, bool no_overlap=false)
Decompose domain box into BoxArray.
void Abort(const std::string &msg)
Print out message to cerr and exit via abort().
Definition AMReX.cpp:230
void ParallelCopy(MF &dst, MF const &src, int scomp, int dcomp, int ncomp, IntVect const &ng_src=IntVect(0), IntVect const &ng_dst=IntVect(0), Periodicity const &period=Periodicity::NonPeriodic())
dst = src w/ MPI communication
Definition AMReX_FabArrayUtility.H:1873
Arena * The_Arena()
Definition AMReX_Arena.cpp:616
Definition AMReX_DataAllocator.H:29
Definition AMReX_FFT_Helper.H:58
bool twod_mode
Definition AMReX_FFT_Helper.H:69
int batch_size
Batched FFT size. Only support in R2C, not R2X.
Definition AMReX_FFT_Helper.H:72
DomainStrategy domain_strategy
Domain composition strategy.
Definition AMReX_FFT_Helper.H:60
int nprocs
Max number of processes to use.
Definition AMReX_FFT_Helper.H:75
int pencil_threshold
Definition AMReX_FFT_Helper.H:64
Definition AMReX_FFT_Helper.H:126
std::conditional_t< std::is_same_v< float, T >, cuComplex, cuDoubleComplex > VendorComplex
Definition AMReX_FFT_Helper.H:130
Definition AMReX_FFT_Helper.H:1495
Definition AMReX_FFT_Helper.H:1470
Definition AMReX_FFT_Helper.H:1424
Definition AMReX_FFT_Helper.H:1447
Definition AMReX_FFT_Helper.H:1522
Box make_box(Box const &box) const
Definition AMReX_FFT.cpp:142
FabArray memory allocation information.
Definition AMReX_FabArray.H:66
MFInfo & SetAlloc(bool a) noexcept
Definition AMReX_FabArray.H:73
This class specializes behaviour on local copies and unpacking receive buffers.
Definition AMReX_NonLocalBC.H:619
Contains information about which components take part of the data transaction.
Definition AMReX_NonLocalBC.H:532
int n_components
Definition AMReX_NonLocalBC.H:535
Communication datatype (note: this structure also works without MPI)
Definition AMReX_ccse-mpi.H:68