Block-Structured AMR Software Framework
 
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AMReX_EB_STL_utils.H
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1#ifndef AMREX_EB_STL_UTILS_H_
2#define AMREX_EB_STL_UTILS_H_
3
4#include <AMReX_Config.H>
5#include <AMReX_Geometry.H>
6#include <AMReX_MultiFab.H>
7#include <AMReX_Dim3.H>
8#include <AMReX_EB2_Graph.H>
9
10#include <algorithm>
11#include <cstdint>
12#include <limits>
13#include <utility>
14
15namespace amrex
16{
17
19{
20public:
21 struct Triangle {
23
24 [[nodiscard]] Real cent (int d) const
25 {
26 static_assert(sizeof(XDim3) == sizeof(Real)*3);
27 return Real(1./3.)*((&v1.x)[d] + (&v2.x)[d] + (&v3.x)[d]);
28 }
29
30 [[nodiscard]] std::pair<Real,Real> minmax (int d) const
31 {
32 static_assert(sizeof(XDim3) == sizeof(Real)*3);
33 return std::minmax({(&v1.x)[d], (&v2.x)[d], (&v3.x)[d]});
34 }
35 };
36
37 template <int M, int N>
38 struct BVHNodeT
39 {
40 RealBox boundingbox{AMREX_D_DECL(std::numeric_limits<Real>::max(),
41 std::numeric_limits<Real>::max(),
42 std::numeric_limits<Real>::max()),
43 AMREX_D_DECL(std::numeric_limits<Real>::lowest(),
44 std::numeric_limits<Real>::lowest(),
45 std::numeric_limits<Real>::lowest())};
48 int children[N];
49 std::int8_t ntriangles = 0;
50 std::int8_t nchildren = 0;
51 };
52
53 static constexpr int m_bvh_max_size = 4; // max # of triangles in a leaf node
54 static constexpr int m_bvh_max_splits = 4; // max # of children
55 static constexpr int m_bvh_max_stack_size = 12; // max depth of the tree
56
58
59 static constexpr int allregular = -1;
60 static constexpr int mixedcells = 0;
61 static constexpr int allcovered = 1;
62
63 void setBVHOptimization (bool flag) { m_bvh_optimization = flag; }
64
65 void read_stl_file (std::string const& fname, Real scale, Array<Real,3> const& center,
66 int reverse_normal);
67
68 void fill (MultiFab& mf, IntVect const& nghost, Geometry const& geom,
69 Real outside_value = -1._rt, Real inside_value = 1._rt) const;
70
71 [[nodiscard]] int getBoxType (Box const& box, Geometry const& geom, RunOn) const;
72
73 static constexpr bool isGPUable () noexcept { return true; }
74
75 void fillFab (BaseFab<Real>& levelset, const Geometry& geom, RunOn,
76 Box const& bounding_box) const;
77
78 void getIntercept (Array<Array4<Real>,AMREX_SPACEDIM> const& inter_arr,
79 Array<Array4<EB2::Type_t const>,AMREX_SPACEDIM> const& type_arr,
80 Array4<Real const> const& lst, Geometry const& geom, RunOn,
81 Box const& bounding_box) const;
82
83 static void updateIntercept (Array<Array4<Real>,AMREX_SPACEDIM> const& inter_arr,
84 Array<Array4<EB2::Type_t const>,AMREX_SPACEDIM> const& type_arr,
85 Array4<Real const> const& lst, Geometry const& geom) ;
86
87 void fillSignedDistance (MultiFab& mf, IntVect const& nghost, Geometry const& geom) const;
88
89 void prepare (Gpu::PinnedVector<Triangle> a_tri_pts); // public for cuda
90
91private:
92
93 bool m_bvh_optimization = true;
94
98
99 int m_num_tri=0;
100
101 XDim3 m_ptmin; // All triangles are inside the bounding box defined by
102 XDim3 m_ptmax; // m_ptmin and m_ptmax.
103 XDim3 m_ptref; // The reference point is slightly outside the bounding box.
104 bool m_boundry_is_outside; // Is the bounding box boundary outside or inside the object?
105
106 void read_ascii_stl_file (std::string const& fname, Real scale,
107 Array<Real,3> const& center, int reverse_normal,
108 Gpu::PinnedVector<Triangle>& a_tri_pts);
109 void read_binary_stl_file (std::string const& fname, Real scale,
110 Array<Real,3> const& center, int reverse_normal,
111 Gpu::PinnedVector<Triangle>& a_tri_pts);
112
113 static void build_bvh (Triangle* begin, Triangle * end, Gpu::PinnedVector<Node>& bvh_nodes);
114 static void bvh_size (int ntri, std::size_t& nnodes);
115};
116
117}
118#endif
#define AMREX_D_DECL(a, b, c)
Definition AMReX_SPACE.H:171
A FortranArrayBox(FAB)-like object.
Definition AMReX_BaseFab.H:183
Rectangular problem domain geometry.
Definition AMReX_Geometry.H:73
A collection (stored as an array) of FArrayBox objects.
Definition AMReX_MultiFab.H:38
Definition AMReX_PODVector.H:297
A Box with real dimensions. A RealBox is OK iff volume >= 0.
Definition AMReX_RealBox.H:21
Definition AMReX_EB_STL_utils.H:19
int m_num_tri
Definition AMReX_EB_STL_utils.H:99
static void bvh_size(int ntri, std::size_t &nnodes)
Definition AMReX_EB_STL_utils.cpp:818
static constexpr int allregular
Definition AMReX_EB_STL_utils.H:59
static constexpr int m_bvh_max_stack_size
Definition AMReX_EB_STL_utils.H:55
XDim3 m_ptmax
Definition AMReX_EB_STL_utils.H:102
static void updateIntercept(Array< Array4< Real >, 3 > const &inter_arr, Array< Array4< EB2::Type_t const >, 3 > const &type_arr, Array4< Real const > const &lst, Geometry const &geom)
Definition AMReX_EB_STL_utils.cpp:1271
static constexpr int m_bvh_max_size
Definition AMReX_EB_STL_utils.H:53
static constexpr int m_bvh_max_splits
Definition AMReX_EB_STL_utils.H:54
void fillSignedDistance(MultiFab &mf, IntVect const &nghost, Geometry const &geom) const
Definition AMReX_EB_STL_utils.cpp:1328
Gpu::DeviceVector< Node > m_bvh_nodes
Definition AMReX_EB_STL_utils.H:97
int getBoxType(Box const &box, Geometry const &geom, RunOn) const
Definition AMReX_EB_STL_utils.cpp:911
bool m_bvh_optimization
Definition AMReX_EB_STL_utils.H:93
void prepare(Gpu::PinnedVector< Triangle > a_tri_pts)
Definition AMReX_EB_STL_utils.cpp:559
void fill(MultiFab &mf, IntVect const &nghost, Geometry const &geom, Real outside_value=-1._rt, Real inside_value=1._rt) const
Definition AMReX_EB_STL_utils.cpp:835
void getIntercept(Array< Array4< Real >, 3 > const &inter_arr, Array< Array4< EB2::Type_t const >, 3 > const &type_arr, Array4< Real const > const &lst, Geometry const &geom, RunOn, Box const &bounding_box) const
Definition AMReX_EB_STL_utils.cpp:1087
void read_binary_stl_file(std::string const &fname, Real scale, Array< Real, 3 > const &center, int reverse_normal, Gpu::PinnedVector< Triangle > &a_tri_pts)
Definition AMReX_EB_STL_utils.cpp:433
XDim3 m_ptref
Definition AMReX_EB_STL_utils.H:103
void read_stl_file(std::string const &fname, Real scale, Array< Real, 3 > const &center, int reverse_normal)
Definition AMReX_EB_STL_utils.cpp:406
void setBVHOptimization(bool flag)
Definition AMReX_EB_STL_utils.H:63
Gpu::DeviceVector< XDim3 > m_tri_normals_d
Definition AMReX_EB_STL_utils.H:96
static constexpr int mixedcells
Definition AMReX_EB_STL_utils.H:60
static constexpr bool isGPUable() noexcept
Definition AMReX_EB_STL_utils.H:73
static constexpr int allcovered
Definition AMReX_EB_STL_utils.H:61
void read_ascii_stl_file(std::string const &fname, Real scale, Array< Real, 3 > const &center, int reverse_normal, Gpu::PinnedVector< Triangle > &a_tri_pts)
Definition AMReX_EB_STL_utils.cpp:487
bool m_boundry_is_outside
Definition AMReX_EB_STL_utils.H:104
XDim3 m_ptmin
Definition AMReX_EB_STL_utils.H:101
void fillFab(BaseFab< Real > &levelset, const Geometry &geom, RunOn, Box const &bounding_box) const
Definition AMReX_EB_STL_utils.cpp:1019
static void build_bvh(Triangle *begin, Triangle *end, Gpu::PinnedVector< Node > &bvh_nodes)
Definition AMReX_EB_STL_utils.cpp:734
Gpu::DeviceVector< Triangle > m_tri_pts_d
Definition AMReX_EB_STL_utils.H:95
Definition AMReX_Amr.cpp:49
RunOn
Definition AMReX_GpuControl.H:69
__host__ __device__ Dim3 begin(BoxND< dim > const &box) noexcept
Definition AMReX_Box.H:1899
__host__ __device__ Dim3 end(BoxND< dim > const &box) noexcept
Definition AMReX_Box.H:1908
__host__ __device__ IntVectND< dim > scale(const IntVectND< dim > &p, int s) noexcept
Returns a IntVectND obtained by multiplying each of the components of this IntVectND by s.
Definition AMReX_IntVect.H:1011
std::array< T, N > Array
Definition AMReX_Array.H:24
Definition AMReX_Array4.H:61
Definition AMReX_EB_STL_utils.H:39
XDim3 trinorm[M]
Definition AMReX_EB_STL_utils.H:47
int children[N]
Definition AMReX_EB_STL_utils.H:48
std::int8_t nchildren
Definition AMReX_EB_STL_utils.H:50
std::int8_t ntriangles
Definition AMReX_EB_STL_utils.H:49
STLtools::Triangle triangles[M]
Definition AMReX_EB_STL_utils.H:46
RealBox boundingbox
Definition AMReX_EB_STL_utils.H:40
Definition AMReX_EB_STL_utils.H:21
Real cent(int d) const
Definition AMReX_EB_STL_utils.H:24
XDim3 v1
Definition AMReX_EB_STL_utils.H:22
XDim3 v2
Definition AMReX_EB_STL_utils.H:22
XDim3 v3
Definition AMReX_EB_STL_utils.H:22
std::pair< Real, Real > minmax(int d) const
Definition AMReX_EB_STL_utils.H:30
Definition AMReX_Dim3.H:13
Real x
Definition AMReX_Dim3.H:13